PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022756539.1

Organism

Durio zibethinus

Taxonomic ID

66656

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio

Family

MYB

Protein Properties

Length: 379aa MW: 42732.6 Da PI: 5.1493

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022756539.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	48	2.9e-15	14	62	1	48
TSSS-HHHHHHHHHHHHHTTTT.-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGgg.tWktIartmgkgRtlkqcksrwqkyl 48 +g+W +eEd +l+ +++++G+g +W + ++++g++R++k+c++rw++yl XP_022756539.1 14 KGPWAPEEDAKLKAYIEKYGTGgNWIALPQKIGLKRCGKSCRLRWLNYL 62 79*********************************************97 PP
2	Myb_DNA-binding	37.2	6.8e-12	69	111	2	46
SSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS Myb_DNA-binding 2 grWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46 g +++eEd ++ + G++ W+ Ia+ ++ gRt++++k++w++ XP_022756539.1 69 GGFSEEEDNIICSLYISIGSR-WSIIAAQLP-GRTDNDIKNYWNT 111 569****************.*****.*********97 PP

Sequence ? help Back to Top
Protein Sequence Length: 379 aa Download sequence
MGRAPCCDKA NVKKGPWAPE EDAKLKAYIE KYGTGGNWIA LPQKIGLKRC GKSCRLRWLN 60 YLRPNIKHGG FSEEEDNIIC SLYISIGSRW SIIAAQLPGR TDNDIKNYWN TKLKKKLLGR 120 RKQSNYNNRL SPSNQDLNEA KGADDNQFSQ GLSNSALERL QLHMQLQSLQ NPFSFYNNPA 180 LWPKIHPLQE KMIESIQASN RNLLMQPLLQ NPQPANEQSA DDFYDQPAAT ASLVQRQDYP 240 KISNAKELEL DNFSDGISPS DGPAPFGTGD NLMDSETVPK TDGNDHHGIP QPINEAIQPV 300 SNFQAELEEF FNNKTAGYTP QEDQMAEFDC FKEMNGSKDS LIWWSSDFDA KSASSNSWDS 360 TSVLQSNGMF RDYELGYNM

Sequence ? help Back to Top

Protein Sequence Length: 379 aa Download sequence

MGRAPCCDKA NVKKGPWAPE EDAKLKAYIE KYGTGGNWIA LPQKIGLKRC GKSCRLRWLN  60
YLRPNIKHGG FSEEEDNIIC SLYISIGSRW SIIAAQLPGR TDNDIKNYWN TKLKKKLLGR  120
RKQSNYNNRL SPSNQDLNEA KGADDNQFSQ GLSNSALERL QLHMQLQSLQ NPFSFYNNPA  180
LWPKIHPLQE KMIESIQASN RNLLMQPLLQ NPQPANEQSA DDFYDQPAAT ASLVQRQDYP  240
KISNAKELEL DNFSDGISPS DGPAPFGTGD NLMDSETVPK TDGNDHHGIP QPINEAIQPV  300
SNFQAELEEF FNNKTAGYTP QEDQMAEFDC FKEMNGSKDS LIWWSSDFDA KSASSNSWDS  360
TSVLQSNGMF RDYELGYNM

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G57620.1	1e-102	MYB family protein