PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022756569.1
Organism
Durio zibethinus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio
Family GRAS
Protein Properties Length: 534aa    MW: 60437.6 Da    PI: 4.4961
Description GRAS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022756569.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GRAS160.11.9e-491685343374
            GRAS   3 elLlecAeavssgdlelaqalLarlselaspdgdpmqRlaayfteALaarlarsvselykalppsetseknsseelaalklfsevsPilkfshlt 97 
                     +lL +c  a+ s+++ela+++L rl+e asp+g++++R a+y+t AL ++ +           ++e+    s++  aa+k+f++++P+ +f+h+t
  XP_022756569.1 168 RLLKACGVALGSEQMELAEEILRRLKEKASPTGKSLERFAFYLTLALDKQANY---------LMQES----SKNYEAAFKAFYQIFPYGRFAHFT 249
                     6889999******************************************9998.........22233....455667899*************** PP

            GRAS  98 aNqaIleavege.ervHiiDfdisqGlQWpaLlqaLasRpegppslRiTgvgspesg...skeeleetgerLakfAeelgvpfefnvlvak.rle 187
                     aN+aIlea+  +  +vHi+Df+i++G+QWp+L++aL    +g  +lR+T ++  +++   s ++ eet+++L   A ++g++++ + +  +  ++
  XP_022756569.1 250 ANSAILEAIPANvMAVHIVDFEIGKGIQWPPLIKALGR--QGLRTLRVTSIKWGKEDgscSPTTFEETKKQLCGHAMNFGLRLKVEEMDIEgLVN 342
                     *********999899*********************98..6999*******9988888999*************************983332445 PP

            GRAS 188 dleleeLrvkpgEalaVnlvlqlhrlldesvsleserdevLklvksl.........sPkvvvvveqe..adh..nsesFlerflealeyysalfd 269
                     +++  + r ++ E la n+++ l ++   ++ + ++ +++L + k l         s +vv++  +   ++   +s sF   f   + y+ al+d
  XP_022756569.1 343 EIKKARERPRNSEWLAFNCMVGLPHMG--RGRSLKHFEDFLTTAKALirspgetdgSNRVVIILGSGngVEKwmDSRSFNSFFEAQMVYFQALLD 435
                     55555555555***************8..555555599******999775555554457877766543444444788999999999********* PP

            GRAS 270 sleaklpreseerikvErellgreivnvvacegaerrerhetlekWrerleeaGFkpvplsekaakqaklllrkvk.sdgyrve.eesgslvlgW 362
                     s+e+   +  ++ri +E  ++ ++++++   ++ e + r+       e l+e G++p ++s +++ +a+ l+++ + s   r++ e++ ++vlg 
  XP_022756569.1 436 SMEQC--QLLDARIAMECLFVVPNLCSLADVQEWEETTREC------ESLRELGLEPQRMSWENYLEARELVKESEnSYWLRIDrEDNSQMVLGY 522
                     **988..567*****************99999999555444......789*************************94333555577788899*** PP

            GRAS 363 kdrpLvsvSaWr 374
                     ++ pLv v++Wr
  XP_022756569.1 523 MGAPLVRVCSWR 534
                     ***********8 PP
Sequence ? help Back to Top
Protein Sequence    Length: 534 aa     Download sequence    
MLQMEFHPSW STYNPLDSSL EVGFCFAEMD AQVSNFEFST SSVSIEDFYD ISSSMLLSST  60
LYGSETYSCP FLANNLPVIL RGEQCLSRVD EDDTSSNDQF MLDGVENFSE WMASDSSISS  120
QKNFTEDISS QNLSAIAGEV SLDVRLVQAS SVLPAAYMEV EDQLIIHRLL KACGVALGSE  180
QMELAEEILR RLKEKASPTG KSLERFAFYL TLALDKQANY LMQESSKNYE AAFKAFYQIF  240
PYGRFAHFTA NSAILEAIPA NVMAVHIVDF EIGKGIQWPP LIKALGRQGL RTLRVTSIKW  300
GKEDGSCSPT TFEETKKQLC GHAMNFGLRL KVEEMDIEGL VNEIKKARER PRNSEWLAFN  360
CMVGLPHMGR GRSLKHFEDF LTTAKALIRS PGETDGSNRV VIILGSGNGV EKWMDSRSFN  420
SFFEAQMVYF QALLDSMEQC QLLDARIAME CLFVVPNLCS LADVQEWEET TRECESLREL  480
GLEPQRMSWE NYLEARELVK ESENSYWLRI DREDNSQMVL GYMGAPLVRV CSWR
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G03450.13e-21GRAS family protein