PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022756577.1
Organism
Durio zibethinus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio
Family ARF
Protein Properties Length: 719aa    MW: 79441.4 Da    PI: 7.3056
Description ARF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022756577.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B369.93.3e-22113214199
                     EEEE-..-HHHHTT-EE--HHH.HTT.......---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSS CS
              B3   1 ffkvltpsdvlksgrlvlpkkfaeeh.......ggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrs 88 
                     f k+lt+sd+++ g +++p+ +ae++         ++ +  t++ +d +g+ W++++iyr++++r++lt+GW+ Fv++++L +gD++vF   + +
  XP_022756577.1 113 FAKTLTQSDANNGGGFSVPRYCAETIfprldysVDPPVQ--TVIAKDVHGEIWKFRHIYRGTPKRHLLTTGWSTFVNQKKLVAGDSIVFL--RAE 203
                     89****************************985434444..8************************************************..348 PP

                     EE..EEEEE-S CS
              B3  89 efelvvkvfrk 99 
                     ++ l+ +++r+
  XP_022756577.1 204 NGDLYAGIRRA 214
                     88889999986 PP
2Auxin_resp113.91.4e-37283365283
      Auxin_resp   2 ahaastksvFevvYnPrastseFvvkvekvekalkvkvsvGmRfkmafetedsserrl.sGtvvgvsdldpvrWpnSkWrsLk 83 
                     +  a+ +++Fe++Y+Prast+eF+vk++ v++a+++ ++ GmRfkmafetedss++++ +Gtv++v+ +dpvrWpnS+Wr+L+
  XP_022756577.1 283 VAIAAGGQPFEIIYYPRASTPEFCVKASAVRAAMRITWCSGMRFKMAFETEDSSRISWfMGTVSSVQVADPVRWPNSPWRLLQ 365
                     5667889**************************************************************************97 PP
Sequence ? help Back to Top
Protein Sequence    Length: 719 aa     Download sequence    
MKESEKNLDP QLWHACAGSM VQIPPVNSKV FYFPQGHAEH SLSFVDFSSP PQIPALVLCR  60
VASVKYLADA ETDEVYAKIM LIPLPNSERY FEDDAVSGGG FNGSDNVEKS ASFAKTLTQS  120
DANNGGGFSV PRYCAETIFP RLDYSVDPPV QTVIAKDVHG EIWKFRHIYR GTPKRHLLTT  180
GWSTFVNQKK LVAGDSIVFL RAENGDLYAG IRRAKRGIGN GTESSAPGWN TGLGNGNDVS  240
PYGGFSAFLR EDESKIMRNG NLGCGGNLRG KGKVRPEGVL EAVAIAAGGQ PFEIIYYPRA  300
STPEFCVKAS AVRAAMRITW CSGMRFKMAF ETEDSSRISW FMGTVSSVQV ADPVRWPNSP  360
WRLLQVRWDE PDLLQNVKRV SPWLVELVSN MPAIHLSPFS TPRKKLRVPQ HLDFPLNGQF  420
PVPSFSGNPL GHRSPLHCLS DNAPASIQGT RHAQFGLSLS DLDHKHKLQS GLFLSSFQRF  480
DPQSRISDGI MTARCTNSDE NLSCLLTMGN SSQKHKSDNR KRHQFLLFGQ PILTEQQLSR  540
SCSSESVSQV INAKSSLDDN ADKTKDSSDN SGSAFENHFS PEKSSKSSTA EFLWHQDYRT  600
TEPGLDTGHC KVFLESQDVG RTLDLSVLGS YEELYRQLAN MFGIEISEML DHLLYQDATG  660
AVKQTGDEPF SAFMKIAKRL TIRMDSGNDT VGRTWLTGMR TAENGLEGPD KTGHLSIFG
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G28350.10.0ARF family protein