PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022756585.1

Organism

Durio zibethinus

Taxonomic ID

66656

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio

Family

WOX

Protein Properties

Length: 228aa MW: 26345 Da PI: 9.7637

Description

WOX family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022756585.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Homeobox	63.8	2.4e-20	7	66	3	57
--SS--HHHHHHHHHHHHH.SSS--HHHHHHHHHHC....TS-HHHHHHHHHHHHHHHHC CS Homeobox 3 kRttftkeqleeLeelFek.nrypsaeereeLAkkl....gLterqVkvWFqNrRakekk 57 +R+++t+eql +Lee F++ r+p+a+++++++++l +++ ++V++WFqN++a+e++ XP_022756585.1 7 SRWCPTPEQLMILEETFRSgIRTPNASQIQRITSHLsfygRIEGKNVFYWFQNHKARERQ 66 7***************99************************************97 PP
2	Wus_type_Homeobox	117.7	5.1e-38	6	67	3	64
Wus_type_Homeobox 3 rtRWtPtpeQikiLeelyksGlrtPnkeeiqritaeLeeyGkiedkNVfyWFQNrkaRerqk 64 ++RW+PtpeQ++iLee ++sG+rtPn+++iqrit++L+ yG+ie+kNVfyWFQN+kaRerqk XP_022756585.1 6 SSRWCPTPEQLMILEETFRSGIRTPNASQIQRITSHLSFYGRIEGKNVFYWFQNHKARERQK 67 79***********************************************************9 PP

Sequence ? help Back to Top
Protein Sequence Length: 228 aa Download sequence
MSPAGSSRWC PTPEQLMILE ETFRSGIRTP NASQIQRITS HLSFYGRIEG KNVFYWFQNH 60 KARERQKLRR KLTKQPQLQQ QRYHQHQLQQ NHPNHHFLHY FDSSSPPSFQ HLSCYNSASL 120 VPQVGIFHED AAAKQTMNYA WKFDIPEKGD MEKAMMRTYG SDWLMMVDMG PRLPPCFSTR 180 APLKTLELFP VTATNLKEEC NNNNNNSSKP LACISNNPTP AKVPLTLP

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G28610.1	1e-42	WOX family protein