PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022756594.1

Organism

Durio zibethinus

Taxonomic ID

66656

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio

Family

MYB

Protein Properties

Length: 244aa MW: 28391.2 Da PI: 9.0139

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022756594.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	57.1	4.2e-18	10	57	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 +g+WT+ Ed llv++v+++G ++W+ Ia+ g++Rt+k+c++rw +yl XP_022756594.1 10 KGPWTEKEDILLVNVVHLFGDRRWDYIAKVSGLNRTGKSCRLRWVNYL 57 79********************************************97 PP
2	Myb_DNA-binding	49.7	8.4e-16	63	108	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 rg++ ++E+ l ++++++G++ W++Iar+++ gRt++++k++w++++ XP_022756594.1 63 RGKMRPQEERLVMELHAKWGNR-WSRIARKLP-GRTDNEIKNYWRTHM 108 79999***************.*****.**********986 PP

Sequence ? help Back to Top
Protein Sequence Length: 244 aa Download sequence
MKMVQDEIRK GPWTEKEDIL LVNVVHLFGD RRWDYIAKVS GLNRTGKSCR LRWVNYLHPG 60 LKRGKMRPQE ERLVMELHAK WGNRWSRIAR KLPGRTDNEI KNYWRTHMRK MAQETKRAMS 120 PSSSTTTTVD SLPFSGTGKV SFYDTGGPDM AALAGKNSSE FQVEKGYSMD DIWKDIEMSE 180 ENTIKPLSNY SEEGRNFSCP SMASPSWEYC WDLLWKMDEE ESKMFLPTNQ FLSYNEYGRA 240 SING

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G59780.3	2e-95	MYB family protein