PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022756684.1
Organism
Durio zibethinus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio
Family LBD
Protein Properties Length: 209aa    MW: 22651.7 Da    PI: 5.7451
Description LBD family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022756684.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1DUF260127.94.8e-40471471100
          DUF260   1 aCaaCkvlrrkCakd.CvlapyfpaeqpkkfanvhklFGasnvlkllkalpeeeredamsslvyeAearardPvyGavgvilklqqqleqlkael 94 
                     +CaaCk+lrr+C++d C lapyfp ++p+kf ++h++FGasn++k+l++lpe++r da+ss+vyeA ar+rdPvyG++g i +lq+ +++l+a+l
  XP_022756684.1  47 PCAACKILRRRCSADkCLLAPYFPPTEPAKFTIAHRVFGASNIIKFLQDLPESQRADAVSSMVYEASARIRDPVYGCAGAICQLQKLVNELQAQL 141
                     7***********9877******************************************************************************* PP

          DUF260  95 allkee 100
                     a++++e
  XP_022756684.1 142 AKAQAE 147
                     *99976 PP
Sequence ? help Back to Top
Protein Sequence    Length: 209 aa     Download sequence    
MEYSEATPAA TPTTTTSSPR SLSPNSSNSS SPSTHIATPT PPVVVSPCAA CKILRRRCSA  60
DKCLLAPYFP PTEPAKFTIA HRVFGASNII KFLQDLPESQ RADAVSSMVY EASARIRDPV  120
YGCAGAICQL QKLVNELQAQ LAKAQAEVVN MQLQQANLVA LLCMEMAQSP QPNSQQSVDT  180
FISSPQSYQS NPNFMEDNNL GSLWEPLWT
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G28500.12e-68LBD family protein