PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022756790.1
Organism
Durio zibethinus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio
Family NF-YA
Protein Properties Length: 329aa    MW: 36180.6 Da    PI: 9.3746
Description NF-YA family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022756790.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1CBFB_NFYA102.54e-32155211158
       CBFB_NFYA   1 deplYVNaKQyqrIlkRRqkRakleeekkldeksrkpylheSRhkhAlrRpRgsgGrF 58 
                     +ep+YVNaKQy++Il+RRq Rak+e ekk+ +k rkpylheSRh hA+rR+Rg+gGrF
  XP_022756790.1 155 EEPVYVNAKQYHGILRRRQIRAKAELEKKV-IKVRKPYLHESRHLHAMRRARGCGGRF 211
                     69****************************.**************************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 329 aa     Download sequence    
MPAKPGNEDQ QIDHGAQSML QSTTYSEPWW KGVGMNPLGE AASKSPSVEK LNCSVANGAV  60
HSQANGGFVN GDGRNGQDRL HLKHVPSTAS LTLGGHLEPN SQMELVGHSI VLTSYPYSDM  120
QYGGMMTSYR PQMMMSPHLY GMHHARMLLP LQMEEEPVYV NAKQYHGILR RRQIRAKAEL  180
EKKVIKVRKP YLHESRHLHA MRRARGCGGR FLNTKKLDDD VTSPTSEKGM NSDENVSSKS  240
AHLSGSDCVS ANRTENLNSF YGQQEGNGSL VQDLHEAQPL GNGNTKGRCL SSMYHSSSND  300
AVKVNYFGKP KDIVQRNGAQ AQHGAPSIK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G12840.18e-51NF-YA family protein