PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022756854.1
Organism
Durio zibethinus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio
Family MIKC_MADS
Protein Properties Length: 254aa    MW: 29015.2 Da    PI: 8.935
Description MIKC_MADS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022756854.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1SRF-TF88.63.4e-28959151
                    S---SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSEEEEEE- CS
          SRF-TF  1 krienksnrqvtfskRrngilKKAeELSvLCdaevaviifsstgklyeyss 51
                    krien   rqvtfskRr+g+lKKA+EL +LCdaevaviifs+tgkl+e+ss
  XP_022756854.1  9 KRIENANSRQVTFSKRRAGLLKKAKELAILCDAEVAVIIFSNTGKLFEFSS 59
                    79***********************************************96 PP
2K-box70.16.7e-24771725100
           K-box   5 sgksleeakaeslqqelakLkkeienLqreqRhllGedLesLslkeLqqLeqqLekslkkiRskKnellleqieelqkkekelqeenkaLrkkle 99 
                     s  ++ e+k e+ ++e+++Lk+ i +Lq +q +llG++L+++slkeLq LeqqL+++l ++++kK++ll+eq+++++ +e+++  en++Lr+++e
  XP_022756854.1  77 SEIAQVEHKVEKDSKEVDNLKDVIAKLQIKQLQLLGKNLTNMSLKELQLLEQQLDEGLLSVKEKKEQLLMEQLQQSRVQEQRAILENETLRRQVE 171
                     4444788999***********************************************************************************98 PP

           K-box 100 e 100
                     e
  XP_022756854.1 172 E 172
                     7 PP
Sequence ? help Back to Top
Protein Sequence    Length: 254 aa     Download sequence    
MGRGKIEIKR IENANSRQVT FSKRRAGLLK KAKELAILCD AEVAVIIFSN TGKLFEFSSS  60
GMKKTLARYN KCSQGSSEIA QVEHKVEKDS KEVDNLKDVI AKLQIKQLQL LGKNLTNMSL  120
KELQLLEQQL DEGLLSVKEK KEQLLMEQLQ QSRVQEQRAI LENETLRRQV EELRSLFPST  180
DRRVQSYLEC YPVERKNSLM SHSIPSPDVT CNCTVEKGDS DTTLYLGLPN DYHKRKKAER  240
ETHSNDSESQ LGLM
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G13790.14e-70MIKC_MADS family protein