PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022756991.1
Organism
Durio zibethinus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio
Family HD-ZIP
Protein Properties Length: 792aa    MW: 88388.6 Da    PI: 5.4443
Description HD-ZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022756991.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Homeobox64.21.8e-2084139156
                     TT--SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHH CS
        Homeobox   1 rrkRttftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRakek 56 
                     +++ +++t+ q++e+e++F+++++p+ ++r +L+++lgL+ rqVk+WFqNrR+++k
  XP_022756991.1  84 KKRYHRHTARQIQEMEAVFNECPHPDDKQRMKLSQELGLKPRQVKFWFQNRRTQMK 139
                     688899***********************************************998 PP
2START1541.2e-482825082206
                     HHHHHHHHHHHHHHHC-TT-EEEEEXCCTTEEEEEEESSS..............SCEEEEEEEECCSCHHHHHHHHHCCCGGCT-TT-S....EE CS
           START   2 laeeaaqelvkkalaeepgWvkssesengdevlqkfeeskv.............dsgealrasgvvdmvlallveellddkeqWdetla....ka 79 
                     la + ++elvk+  a+ep+W +    eng+e l  +e ++              +++ea+r+++vv+m++++lv  +ld + +W+e ++    +a
  XP_022756991.1 282 LAMSSMDELVKMCRANEPLWIRNN--ENGKELLNLEEHGRMfhwplnlkqrpseFRTEASRDCAVVIMNSVTLVDAFLDAN-KWTELFPsivaRA 373
                     67789*****************99..**********99999****************************************.************* PP

                     EEEEEECTT.....EEEEEEEEXXTTXX-SSX.EEEEEEEEEEE....TTS-EEEEEEEEE-TTS--.-TTSEE-EESSEEEEEEEECTCEEEEE CS
           START  80 etlevissg.....galqlmvaelqalsplvp.RdfvfvRyirq...lgagdwvivdvSvdseqkppesssvvRaellpSgiliepksnghskvt 165
                     +t++vis+g     g lqlm+aelq+lsplvp R+ +f+Ry++q   + +  w+ivd   d   ++  + s+   +++pSg+li++++ng+s+vt
  XP_022756991.1 374 KTVQVISPGvsgtnGSLQLMYAELQVLSPLVPtREAYFLRYCQQqnlDDETYWAIVDFPYDGFHNNL-ETSFPLYKRRPSGCLIQDMPNGYSRVT 467
                     ********************************************99888889*****9999999887.67777777******************* PP

                     EEE-EE--SSXXHHHHHHHHHHHHHHHHHHHHHHTXXXXXX CS
           START 166 wvehvdlkgrlphwllrslvksglaegaktwvatlqrqcek 206
                     wveh++ +++ +h+++ ++v +g+a+ga +w++ l+rqce+
  XP_022756991.1 468 WVEHAEIEEKPVHQIFSHFVYNGIAFGAHRWLSVLERQCER 508
                     ***************************************97 PP
Sequence ? help Back to Top
Protein Sequence    Length: 792 aa     Download sequence    
MYGDCQVISS MGGNVVSSET LFSSPIQNPS FNFLPFQPLP PMIPKEENGL LLRGKEEMDS  60
GSGSEQAEEK SGNEQESTEQ PPKKKRYHRH TARQIQEMEA VFNECPHPDD KQRMKLSQEL  120
GLKPRQVKFW FQNRRTQMKA QQDRSDNVIL RAENESLKNE FYQLQAELSK LVCPNCGGPA  180
VPGGISFEEI RIENARLREE LERVCAIASR YIGRPIQTMG ADPAMMPPSL DLDMNIYARH  240
FTEPMASCVE MMLVPMLPET ASFPENNNLV LMDEEKTVAM ELAMSSMDEL VKMCRANEPL  300
WIRNNENGKE LLNLEEHGRM FHWPLNLKQR PSEFRTEASR DCAVVIMNSV TLVDAFLDAN  360
KWTELFPSIV ARAKTVQVIS PGVSGTNGSL QLMYAELQVL SPLVPTREAY FLRYCQQQNL  420
DDETYWAIVD FPYDGFHNNL ETSFPLYKRR PSGCLIQDMP NGYSRVTWVE HAEIEEKPVH  480
QIFSHFVYNG IAFGAHRWLS VLERQCERIA SLMARNITDL GVIPSPEARK NLMRLAQRMI  540
RTFCVNISTS SGQLWTALPD SSDDTVRITT RKVMEPGQPN GLILCAVSTT WLPYPHYQVF  600
DLLKDERRRA QLEVLSNGNA LHEVAHIANG AHPGNCISLL RINVASNSSQ HVELMLQESC  660
TDRSGSLVVY STVGVDSIQL AMSGEDPSCI PLLPLGFFIT PVELIRDEGK SVPPSEEANG  720
HIQGSLLTVG LQVLASTVPS AKINLSSIAA INNHLCTTVH QISAALSSSS PSSPGNGNGV  780
GSCTEPATAH EK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G46880.10.0HD-ZIP family protein