PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022757103.1
Organism
Durio zibethinus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio
Family LBD
Protein Properties Length: 238aa    MW: 24670 Da    PI: 7.9575
Description LBD family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022757103.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1DUF260129.31.7e-40301301100
          DUF260   1 aCaaCkvlrrkCakdCvlapyfpaeq.pkkfanvhklFGasnvlkllkalpeeeredamsslvyeAearardPvyGavgvilklqqqleqlkael 94 
                     +C aCk+lrrkC+++C++apyf +eq +++fa+vhk+FGasnv+kll ++p ++r da+ +++yeA+ r+rdPvyG+v++i++lqqq+ +l+ael
  XP_022757103.1  30 PCGACKFLRRKCVPGCIFAPYFDSEQgAAHFAAVHKVFGASNVSKLLLHIPVHKRLDAVVTICYEAQTRLRDPVYGCVAHIFALQQQVVNLQAEL 124
                     7***********************9989******************************************************************* PP

          DUF260  95 allkee 100
                     ++l+++
  XP_022757103.1 125 SYLQAH 130
                     *99986 PP
Sequence ? help Back to Top
Protein Sequence    Length: 238 aa     Download sequence    
MSAKPSSSGG SVGGGAGSCS SGGGGGGGGP CGACKFLRRK CVPGCIFAPY FDSEQGAAHF  60
AAVHKVFGAS NVSKLLLHIP VHKRLDAVVT ICYEAQTRLR DPVYGCVAHI FALQQQVVNL  120
QAELSYLQAH LATLELPSPP PPPQPQTLMA PPPLSISDLP SASSVPATYD LSSLFDPMVQ  180
PSWAMQQRQI DPRQFGGSGS SSSTGCGDLQ ALARELLHRQ GSPQLPCTDA SSSPSLSK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G45420.12e-81LBD family protein