PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022757144.1

Organism

Durio zibethinus

Taxonomic ID

66656

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio

Family

MIKC_MADS

Protein Properties

Length: 215aa MW: 25048.8 Da PI: 10.1039

Description

MIKC_MADS family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022757144.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	SRF-TF	95.4	2.5e-30	9	59	1	51
S---SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSEEEEEE- CS SRF-TF 1 krienksnrqvtfskRrngilKKAeELSvLCdaevaviifsstgklyeyss 51 krien + rqvtfskRrng+lKKA+ELSvLCdaeva+iifs++gklye++s XP_022757144.1 9 KRIENATSRQVTFSKRRNGLLKKAFELSVLCDAEVALIIFSTRGKLYEFAS 59 79***********************************************86 PP
2	K-box	84.5	2.2e-28	78	169	7	98
K-box 7 ksleeakaeslqqelakLkkeienLqreqRhllGedLesLslkeLqqLeqqLekslkkiRskKnellleqieelqkkekelqeenkaLrkkl 98 ++ +e++ ++l++e++++ k+ie L+ + R+llGe+L+s++l+eLqq+eqqLe+s+++iR++K+++++eqie+l++kek l en +L +k+ XP_022757144.1 78 TKPTEQNLQHLKTEAENMMKKIELLEVSRRKLLGEGLGSCTLEELQQIEQQLERSVSSIRARKTQVFKEQIERLKEKEKVLAAENAKLCEKY 169 347899**********************************************************************************9886 PP

Sequence ? help Back to Top
Protein Sequence Length: 215 aa Download sequence
MVRGKTQMKR IENATSRQVT FSKRRNGLLK KAFELSVLCD AEVALIIFST RGKLYEFASS 60 SMKDTIERYM RHMKDNRTKP TEQNLQHLKT EAENMMKKIE LLEVSRRKLL GEGLGSCTLE 120 ELQQIEQQLE RSVSSIRARK TQVFKEQIER LKEKEKVLAA ENAKLCEKYG MKQWKRSNEQ 180 KENVPYDESS PSSDVETELF IGPPEGRTKR FLQPN

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G45660.1	1e-89	MIKC_MADS family protein