PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022757228.1

Organism

Durio zibethinus

Taxonomic ID

66656

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio

Family

MYB

Protein Properties

Length: 553aa MW: 61973.7 Da PI: 9.239

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022757228.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	38.6	2.6e-12	45	93	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHH..HHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktI..artmgkgRtlkqcksrwqkyl 48 +g WT+eEd+ l av+++ g++Wk+I ++ ++ Rt+ qc +rwqk+l XP_022757228.1 45 KGGWTEEEDKMLTVAVQKFNGKNWKKIglPEWVP-ERTDVQCLHRWQKVL 93 688*********************84445566.**********986 PP
2	Myb_DNA-binding	58.1	2e-18	99	145	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 +g+W++eEd+l++++v++ G++ W+ Ia++++ gR +kqc++rw ++l XP_022757228.1 99 KGPWSKEEDDLILELVQKQGKKKWSEIAKYLP-GRIGKQCRERWCNHL 145 79****************************.***********96 PP
3	Myb_DNA-binding	52.7	1e-16	152	193	2	45
SSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHH CS Myb_DNA-binding 2 grWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwq 45 +WT+eE++ l++a+ +G++ W+ Ia+ ++ gRt++++k++w+ XP_022757228.1 152 TAWTEEEELVLIRAHGTYGNR-WAEIAKLLP-GRTENSIKNHWN 193 68*****************.*****.*********8 PP

Sequence ? help Back to Top
Protein Sequence Length: 553 aa Download sequence
MEQVKEDGGT DNTTTTSIDD THDNVVRKTV TVQGRISGPT RRSTKGGWTE EEDKMLTVAV 60 QKFNGKNWKK IGLPEWVPER TDVQCLHRWQ KVLNPDLIKG PWSKEEDDLI LELVQKQGKK 120 KWSEIAKYLP GRIGKQCRER WCNHLNPDIK KTAWTEEEEL VLIRAHGTYG NRWAEIAKLL 180 PGRTENSIKN HWNCSVRKKV ELLAASRINL GNQNRRVECM SFGLGKPLEQ KVNQGSTDLY 240 SLGLGHGDND RRESNLVVSN KENCRVMRKD ANLILKPSSL TISSNRYDDA CDLTIKKHQV 300 YACEAGAAGN SNNLAAEPDW SDKFCHTSFG NHVKFPFLHE RTTKLSLHTR MLSGPSHLPL 360 STSLNTDFTA ACDRKSALPG FVERLSNSSV RPQDRNDGNT ENVEFRLGCL CYESLQQKDL 420 NTFLTTGRFL DTDSYIRKVS TPVVLDIPPI NSTCPESILR SAAKSFKNTP SIIRKRSSQT 480 TKQTGNHNQS DGVGSNAKQP FPSPSKSAKL ETTAAIKSVE KRLEYAFDDI VKDSSSNITR 540 TSAVDHSSST NST

Sequence ? help Back to Top

Protein Sequence Length: 553 aa Download sequence

MEQVKEDGGT DNTTTTSIDD THDNVVRKTV TVQGRISGPT RRSTKGGWTE EEDKMLTVAV  60
QKFNGKNWKK IGLPEWVPER TDVQCLHRWQ KVLNPDLIKG PWSKEEDDLI LELVQKQGKK  120
KWSEIAKYLP GRIGKQCRER WCNHLNPDIK KTAWTEEEEL VLIRAHGTYG NRWAEIAKLL  180
PGRTENSIKN HWNCSVRKKV ELLAASRINL GNQNRRVECM SFGLGKPLEQ KVNQGSTDLY  240
SLGLGHGDND RRESNLVVSN KENCRVMRKD ANLILKPSSL TISSNRYDDA CDLTIKKHQV  300
YACEAGAAGN SNNLAAEPDW SDKFCHTSFG NHVKFPFLHE RTTKLSLHTR MLSGPSHLPL  360
STSLNTDFTA ACDRKSALPG FVERLSNSSV RPQDRNDGNT ENVEFRLGCL CYESLQQKDL  420
NTFLTTGRFL DTDSYIRKVS TPVVLDIPPI NSTCPESILR SAAKSFKNTP SIIRKRSSQT  480
TKQTGNHNQS DGVGSNAKQP FPSPSKSAKL ETTAAIKSVE KRLEYAFDDI VKDSSSNITR  540
TSAVDHSSST NST

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G32730.1	7e-82	MYB family protein