PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022757229.1

Organism

Durio zibethinus

Taxonomic ID

66656

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio

Family

MYB

Protein Properties

Length: 551aa MW: 61777.4 Da PI: 9.239

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022757229.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	50.3	5.7e-16	45	91	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 +g WT+eEd+ l av+++ g++Wk+Ia+ ++ Rt+ qc +rwqk+l XP_022757229.1 45 KGGWTEEEDKMLTVAVQKFNGKNWKKIAEWVP-ERTDVQCLHRWQKVL 91 688***************************.**********986 PP
2	Myb_DNA-binding	58.1	2e-18	97	143	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 +g+W++eEd+l++++v++ G++ W+ Ia++++ gR +kqc++rw ++l XP_022757229.1 97 KGPWSKEEDDLILELVQKQGKKKWSEIAKYLP-GRIGKQCRERWCNHL 143 79****************************.***********96 PP
3	Myb_DNA-binding	52.7	1e-16	150	191	2	45
SSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHH CS Myb_DNA-binding 2 grWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwq 45 +WT+eE++ l++a+ +G++ W+ Ia+ ++ gRt++++k++w+ XP_022757229.1 150 TAWTEEEELVLIRAHGTYGNR-WAEIAKLLP-GRTENSIKNHWN 191 68*****************.*****.*********8 PP

Sequence ? help Back to Top
Protein Sequence Length: 551 aa Download sequence
MEQVKEDGGT DNTTTTSIDD THDNVVRKTV TVQGRISGPT RRSTKGGWTE EEDKMLTVAV 60 QKFNGKNWKK IAEWVPERTD VQCLHRWQKV LNPDLIKGPW SKEEDDLILE LVQKQGKKKW 120 SEIAKYLPGR IGKQCRERWC NHLNPDIKKT AWTEEEELVL IRAHGTYGNR WAEIAKLLPG 180 RTENSIKNHW NCSVRKKVEL LAASRINLGN QNRRVECMSF GLGKPLEQKV NQGSTDLYSL 240 GLGHGDNDRR ESNLVVSNKE NCRVMRKDAN LILKPSSLTI SSNRYDDACD LTIKKHQVYA 300 CEAGAAGNSN NLAAEPDWSD KFCHTSFGNH VKFPFLHERT TKLSLHTRML SGPSHLPLST 360 SLNTDFTAAC DRKSALPGFV ERLSNSSVRP QDRNDGNTEN VEFRLGCLCY ESLQQKDLNT 420 FLTTGRFLDT DSYIRKVSTP VVLDIPPINS TCPESILRSA AKSFKNTPSI IRKRSSQTTK 480 QTGNHNQSDG VGSNAKQPFP SPSKSAKLET TAAIKSVEKR LEYAFDDIVK DSSSNITRTS 540 AVDHSSSTNS T

Sequence ? help Back to Top

Protein Sequence Length: 551 aa Download sequence

MEQVKEDGGT DNTTTTSIDD THDNVVRKTV TVQGRISGPT RRSTKGGWTE EEDKMLTVAV  60
QKFNGKNWKK IAEWVPERTD VQCLHRWQKV LNPDLIKGPW SKEEDDLILE LVQKQGKKKW  120
SEIAKYLPGR IGKQCRERWC NHLNPDIKKT AWTEEEELVL IRAHGTYGNR WAEIAKLLPG  180
RTENSIKNHW NCSVRKKVEL LAASRINLGN QNRRVECMSF GLGKPLEQKV NQGSTDLYSL  240
GLGHGDNDRR ESNLVVSNKE NCRVMRKDAN LILKPSSLTI SSNRYDDACD LTIKKHQVYA  300
CEAGAAGNSN NLAAEPDWSD KFCHTSFGNH VKFPFLHERT TKLSLHTRML SGPSHLPLST  360
SLNTDFTAAC DRKSALPGFV ERLSNSSVRP QDRNDGNTEN VEFRLGCLCY ESLQQKDLNT  420
FLTTGRFLDT DSYIRKVSTP VVLDIPPINS TCPESILRSA AKSFKNTPSI IRKRSSQTTK  480
QTGNHNQSDG VGSNAKQPFP SPSKSAKLET TAAIKSVEKR LEYAFDDIVK DSSSNITRTS  540
AVDHSSSTNS T

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G32730.1	2e-84	MYB family protein