PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022757279.1

Organism

Durio zibethinus

Taxonomic ID

66656

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio

Family

bHLH

Protein Properties

Length: 263aa MW: 29493 Da PI: 8.2311

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022757279.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	42.3	1.3e-13	59	110	1	55
CHHHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS HLH 1 rrrahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 +r++h ++Er+RR+++N+ ++ Lr+l+P++ + + + a+i+ A+e++k+L+ XP_022757279.1 59 QRMTHIAVERNRRKQMNEHLAVLRSLMPES---YVHRGDQASIVGGAIEFVKELE 110 79**************************...9****************995 PP

Sequence ? help Back to Top
Protein Sequence Length: 263 aa Download sequence
MEALNPISAV QPSLCYLDVC SKSAGAETVD RRPNLAAQGR KKRRRKARVC KDKEEAETQR 60 MTHIAVERNR RKQMNEHLAV LRSLMPESYV HRGDQASIVG GAIEFVKELE HLLQTLEAQK 120 LRVLHQVRPA DANELETTNS ILLSPPFAHF FMYPQYTWSQ IPNKYTSKTK ASIADIEVTL 180 IETHANLRIL SRKGPRLLSK IVTGFESLYL SILHLNVITV DPLVLYSISA KVEEGCQLSS 240 VDDIAGAVHH MLGIIEEDAT ALC

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	40	46	RKKRRRK
2	41	46	KKRRRK
3	60	71	RMTHIAVERNRR

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G72210.1	3e-70	bHLH family protein