PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022757282.1
Organism
Durio zibethinus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio
Family MYB
Protein Properties Length: 316aa    MW: 35092.4 Da    PI: 5.7097
Description MYB family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022757282.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding54.72.4e-171461148
                     TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS
  Myb_DNA-binding  1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48
                     +g+W +eEde+lv+++k++G g+W++ ++  g+ R++k+c++rw +yl
   XP_022757282.1 14 KGPWAPEEDEILVNYIKEHGHGSWRSLPKLAGLLRCGKSCRLRWTNYL 61
                     79******************************99************97 PP
2Myb_DNA-binding46.11.1e-1467112148
                      TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS
  Myb_DNA-binding   1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 
                      rg++T eE++l ++++  lG++ W++Ia+ ++ gRt++++k+ w+++l
   XP_022757282.1  67 RGPFTFEEEKLVIRLHGILGNR-WAAIASQLP-GRTDNEIKNLWNTHL 112
                      89********************.*********.************986 PP
Sequence ? help Back to Top
Protein Sequence    Length: 316 aa     Download sequence    
MGRTPCCDRK GLKKGPWAPE EDEILVNYIK EHGHGSWRSL PKLAGLLRCG KSCRLRWTNY  60
LRPDIKRGPF TFEEEKLVIR LHGILGNRWA AIASQLPGRT DNEIKNLWNT HLKKRLLCMG  120
LDPQTHEPFT PCGPTAAVPT SPATRHMAQW ESARLEAEAR LSKESFLFNS PSFRKPDSDY  180
FLRLWNSEVG ESFRKLNTED KTACQSTSSS TKCGSVSAVT IDICPNIAGS STPASNQIED  240
TECKSFKSCT EDPVDASDSS CLNESEDSSD SALQLLLDFP INNDMSFLEN VDTYATSAAM  300
LTETSLISPS EGYLNS
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G61250.11e-120MYB family protein