PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022757317.1

Organism

Durio zibethinus

Taxonomic ID

66656

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio

Family

bHLH

Protein Properties

Length: 665aa MW: 73120.1 Da PI: 5.1755

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022757317.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	39.1	1.3e-12	485	530	4	54
HHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS HLH 4 ahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54 +h e+Er+RR+++N++f Lr ++P+ K++Ka+ L A+ YI++L XP_022757317.1 485 NHVEAERQRREKLNQRFYALRAVVPNV-----SKMDKASLLGDAISYINEL 530 799*********************6.....5*************998 PP

Sequence ? help Back to Top
Protein Sequence Length: 665 aa Download sequence
MTDYRLAPTM NLWTDDNASV MEAFMSSDFS AFWPPPQSSA STSTPAAVAG GPDLSKSSLA 60 QSQPSVSLLN QETLQQRLQA LIEGAREYWT YAIFWQSSYD CSGTTVLGWG DGYYKGEEDK 120 GKGKLKASSS TVAEQQHRKK VLRELNSLIS GSTATTDDAV DEEVTDTEWF FLVSMTQSFV 180 NGSGLPGQAL FNSSPIWVAG SDRLESSMCE RARQGQVFGL QTMVCIPLAN GVVELGSMEF 240 IMQSSDLMNN VRVLFNFNNG IEAGSWSMSN NTADQGENDP SSLWISDPNN GVELKESNNN 300 GNNNNTSNQN QQIQNSIQFC DNPSSSSLTE NPGSIHAGNH QQGQSFCMNF SNYGFDGSSS 360 VRNGNSSSHL LKPESGEILN FGDSKRSGNG NLFSRNSQFV VEENKKKRSP TSRGSNEEGM 420 LSFTSGVIVP SSDVVKSSGG ARDSDHSDIE ASVVKEADSS RVVEPEKRPR KRGRKPANGR 480 EEPLNHVEAE RQRREKLNQR FYALRAVVPN VSKMDKASLL GDAISYINEL RTKLQNADSE 540 KEELQKQIDE MKKELASKES RSAPPPPPDQ NLKMSNHLGN KLIDLDIDVK IIGWDAMIRI 600 QCSKENHPAA RLMAALKELD LDVHHASVSV VNELMMQQAT VKMVSRFYTQ EQLRLALASK 660 VGDAR

Sequence ? help Back to Top

Protein Sequence Length: 665 aa Download sequence

MTDYRLAPTM NLWTDDNASV MEAFMSSDFS AFWPPPQSSA STSTPAAVAG GPDLSKSSLA  60
QSQPSVSLLN QETLQQRLQA LIEGAREYWT YAIFWQSSYD CSGTTVLGWG DGYYKGEEDK  120
GKGKLKASSS TVAEQQHRKK VLRELNSLIS GSTATTDDAV DEEVTDTEWF FLVSMTQSFV  180
NGSGLPGQAL FNSSPIWVAG SDRLESSMCE RARQGQVFGL QTMVCIPLAN GVVELGSMEF  240
IMQSSDLMNN VRVLFNFNNG IEAGSWSMSN NTADQGENDP SSLWISDPNN GVELKESNNN  300
GNNNNTSNQN QQIQNSIQFC DNPSSSSLTE NPGSIHAGNH QQGQSFCMNF SNYGFDGSSS  360
VRNGNSSSHL LKPESGEILN FGDSKRSGNG NLFSRNSQFV VEENKKKRSP TSRGSNEEGM  420
LSFTSGVIVP SSDVVKSSGG ARDSDHSDIE ASVVKEADSS RVVEPEKRPR KRGRKPANGR  480
EEPLNHVEAE RQRREKLNQR FYALRAVVPN VSKMDKASLL GDAISYINEL RTKLQNADSE  540
KEELQKQIDE MKKELASKES RSAPPPPPDQ NLKMSNHLGN KLIDLDIDVK IIGWDAMIRI  600
QCSKENHPAA RLMAALKELD LDVHHASVSV VNELMMQQAT VKMVSRFYTQ EQLRLALASK  660
VGDAR

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	467	475	KRPRKRGRK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G32640.1	0.0	bHLH family protein