PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022757561.1

Organism

Durio zibethinus

Taxonomic ID

66656

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio

Family

bHLH

Protein Properties

Length: 618aa MW: 68268.5 Da PI: 6.4216

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022757561.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	40.4	5.1e-13	449	495	4	55
HHHHHHHHHHHHHHHHHHHHHCTSCC.C...TTS-STCHHHHHHHHHHHHHHH CS HLH 4 ahnerErrRRdriNsafeeLrellPk.askapskKlsKaeiLekAveYIksLq 55 +h e+Er+RR+++N++f Lr ++P+ + K++Ka+ L A+ YI++Lq XP_022757561.1 449 NHVEAERQRREKLNQRFYALRAVVPNiS------KMDKASLLGDAIAYINELQ 495 799*********************66......****************9 PP

Sequence ? help Back to Top
Protein Sequence Length: 618 aa Download sequence
MQTGMKIEVG MGGGAWNDED KAMVAAVLGT RAFDYLISSS VSNESLLVAI NSDENLQNKL 60 SDLVERPNAS NFSWNYAIFW QISTSKSSDW VLGWGDGCCR EPKEGEESEA TRILNMRLED 120 ETLQKMRKRV LQKLHTLFGG LDEDNYALGL DRVTDTEMFF LASMYFSFPP GEGGPGKCFA 180 SGKHVWISDA LKTGSEYCLR SFLAKSAGVH TIVLVPTDVG VVELGSVRSV PESLELLQSI 240 RSSFSSNSSL IRAKQMAVPI PVVNEKKDEN THFSNLGIVE RVEGIPKIFG QDLNNTSHGH 300 SNYREKLAVR KMEERPTWGA YANGGRLSFS SNQNGLHGSG WPHVHGGKQG SPTEFYGSQN 360 TTNNFPELAS GTREEFRLNP YQSQTPVQMQ INFSGATSRP SAITRPLSGE SEHSDVEASC 420 KEEKTSAADE RRPRKRGRKP ANGREEPLNH VEAERQRREK LNQRFYALRA VVPNISKMDK 480 ASLLGDAIAY INELQAKLKV MEAEREKFGS TSRDLAGLDP NANAGNHILP PDIDVQAVHD 540 EVVVRVRSPL DSHPASRVIQ AFKEAQINVL ESKLVAADDA VFHTFVIKSQ GSEQLTREKL 600 IEAFSHESNS LQPLSSLG

Sequence ? help Back to Top

Protein Sequence Length: 618 aa Download sequence

MQTGMKIEVG MGGGAWNDED KAMVAAVLGT RAFDYLISSS VSNESLLVAI NSDENLQNKL  60
SDLVERPNAS NFSWNYAIFW QISTSKSSDW VLGWGDGCCR EPKEGEESEA TRILNMRLED  120
ETLQKMRKRV LQKLHTLFGG LDEDNYALGL DRVTDTEMFF LASMYFSFPP GEGGPGKCFA  180
SGKHVWISDA LKTGSEYCLR SFLAKSAGVH TIVLVPTDVG VVELGSVRSV PESLELLQSI  240
RSSFSSNSSL IRAKQMAVPI PVVNEKKDEN THFSNLGIVE RVEGIPKIFG QDLNNTSHGH  300
SNYREKLAVR KMEERPTWGA YANGGRLSFS SNQNGLHGSG WPHVHGGKQG SPTEFYGSQN  360
TTNNFPELAS GTREEFRLNP YQSQTPVQMQ INFSGATSRP SAITRPLSGE SEHSDVEASC  420
KEEKTSAADE RRPRKRGRKP ANGREEPLNH VEAERQRREK LNQRFYALRA VVPNISKMDK  480
ASLLGDAIAY INELQAKLKV MEAEREKFGS TSRDLAGLDP NANAGNHILP PDIDVQAVHD  540
EVVVRVRSPL DSHPASRVIQ AFKEAQINVL ESKLVAADDA VFHTFVIKSQ GSEQLTREKL  600
IEAFSHESNS LQPLSSLG

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	431	439	RRPRKRGRK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G01260.1	0.0	bHLH family protein