PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022757564.1

Organism

Durio zibethinus

Taxonomic ID

66656

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio

Family

ARF

Protein Properties

Length: 707aa MW: 78618.7 Da PI: 6.738

Description

ARF family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022757564.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	B3	72	7.3e-23	133	233	1	98
EEEE-..-HHHHTT-EE--HHH.HTT.....---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE CS B3 1 ffkvltpsdvlksgrlvlpkkfaeeh.....ggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsef 90 f+k+lt sd++++g +++ +k+a+e+ +++ + +++l +d++g +W++k+i+r++++r++lt+GW+ Fv +++L +gD +vF + +++ XP_022757564.1 133 FCKILTASDTSTHGGFSVLRKHATEClppldMNQATPTQELAAKDLHGFEWRFKHIFRGQPRRHLLTTGWSTFVTSKRLVAGDAFVFL--RGDNG 225 99**************************9555556679********************************************..34899 PP ..EEEEE- CS B3 91 elvvkvfr 98 el+v+v++ XP_022757564.1 226 ELRVGVRQ 233 999986 PP
2	Auxin_resp	105.7	5.4e-35	259	338	1	83
Auxin_resp 1 aahaastksvFevvYnPrastseFvvkvekvekalkvkvsvGmRfkmafetedsserrlsGtvvgvsdldpvrWpnSkWrsLk 83 aaha++t++ F v+Y+Pr+ s+F++ v+k+++a+++ +svGmRfkm+fe+eds+err++Gt+vgv d++p +W++SkWrsLk XP_022757564.1 259 AAHAVTTHTLFVVYYKPRT--SQFIIGVNKYLEAINNGFSVGMRFKMRFEGEDSPERRFTGTIVGVGDISP-HWSESKWRSLK 338 79**************6..9*******************************************99.*******96 PP

Sequence ? help Back to Top
Protein Sequence Length: 707 aa Download sequence
MAHVEGIPRG SSAHAESGLN VDDLYPELWK LCAGPLVEIP RVHERVFYFP QGHMEQLEAS 60 TNQELNHQAP LFNLPSKILC RVLHVQLLAE QETDEVYAQI TLQPESDQSE PTSPDPCPDP 120 CPIEAPKRTV HSFCKILTAS DTSTHGGFSV LRKHATECLP PLDMNQATPT QELAAKDLHG 180 FEWRFKHIFR GQPRRHLLTT GWSTFVTSKR LVAGDAFVFL RGDNGELRVG VRQLARRQST 240 MPSSVISSQS MHLGVLATAA HAVTTHTLFV VYYKPRTSQF IIGVNKYLEA INNGFSVGMR 300 FKMRFEGEDS PERRFTGTIV GVGDISPHWS ESKWRSLKIQ WDEPATTQRP ERVSPWEIEP 360 FVASASINLV QPAVKSKRPR LVDIPASEIT TNSAGSAFWC RGSTQSHELT QVGSTPEVQS 420 SENQVMWPMR QREVDNNLIN SSAGYNSRTL PENAWPSSLV NVSLNLFPNS MDGNNKTGTP 480 QTVLMGYVSS IQSRPIKGKM HDQAEKGKKS EVSTGCRLFG FNLTDSTCAA VPPDKEQEST 540 VVDYNGVRGS IQVASHIDQN PETSKSSKEQ KQVASETSTK EMQAKQGAAT STRTRTKVHM 600 QGIAVGRAVD LTVLKGYDDL INELEKMFDI KGELCPHGKW SVVFNDDEGD IMLVGDDPWM 660 EFCKMVKKIF IYSSEEVKKI SARCKFQVSS LEGEGTVSLD SEHRSET

Sequence ? help Back to Top

Protein Sequence Length: 707 aa Download sequence

MAHVEGIPRG SSAHAESGLN VDDLYPELWK LCAGPLVEIP RVHERVFYFP QGHMEQLEAS  60
TNQELNHQAP LFNLPSKILC RVLHVQLLAE QETDEVYAQI TLQPESDQSE PTSPDPCPDP  120
CPIEAPKRTV HSFCKILTAS DTSTHGGFSV LRKHATECLP PLDMNQATPT QELAAKDLHG  180
FEWRFKHIFR GQPRRHLLTT GWSTFVTSKR LVAGDAFVFL RGDNGELRVG VRQLARRQST  240
MPSSVISSQS MHLGVLATAA HAVTTHTLFV VYYKPRTSQF IIGVNKYLEA INNGFSVGMR  300
FKMRFEGEDS PERRFTGTIV GVGDISPHWS ESKWRSLKIQ WDEPATTQRP ERVSPWEIEP  360
FVASASINLV QPAVKSKRPR LVDIPASEIT TNSAGSAFWC RGSTQSHELT QVGSTPEVQS  420
SENQVMWPMR QREVDNNLIN SSAGYNSRTL PENAWPSSLV NVSLNLFPNS MDGNNKTGTP  480
QTVLMGYVSS IQSRPIKGKM HDQAEKGKKS EVSTGCRLFG FNLTDSTCAA VPPDKEQEST  540
VVDYNGVRGS IQVASHIDQN PETSKSSKEQ KQVASETSTK EMQAKQGAAT STRTRTKVHM  600
QGIAVGRAVD LTVLKGYDDL INELEKMFDI KGELCPHGKW SVVFNDDEGD IMLVGDDPWM  660
EFCKMVKKIF IYSSEEVKKI SARCKFQVSS LEGEGTVSLD SEHRSET

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G23980.1	0.0	ARF family protein