PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022757591.1
Organism
Durio zibethinus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio
Family HD-ZIP
Protein Properties Length: 249aa    MW: 28517 Da    PI: 5.1555
Description HD-ZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022757591.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Homeobox56.74.2e-1846100256
                     T--SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHH CS
        Homeobox   2 rkRttftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRakek 56 
                     +++++f++eq++ Le +Fe+++ +  +++ + A+ lgL+ rqV +WFqN+Ra++k
  XP_022757591.1  46 KNKRRFSDEQIKSLELMFESESRLEPRKKLQVARDLGLQPRQVAIWFQNKRARWK 100
                     67789*************************************************9 PP
2HD-ZIP_I/II117.67e-3847138293
     HD-ZIP_I/II   2 kkrrlskeqvklLEesFeeeekLeperKvelareLglqprqvavWFqnrRARtktkqlEkdyeaLkraydalkeenerLekeveeLreelke 93 
                     +krr+s+eq+k+LE +Fe+e++Lep++K ++ar+Lglqprqva+WFqn+RAR+k+kqlE+dy  L++ y++l+++ ++L+ke+++L  +l++
  XP_022757591.1  47 NKRRFSDEQIKSLELMFESESRLEPRKKLQVARDLGLQPRQVAIWFQNKRARWKSKQLERDYGILQADYKNLASKFDSLKKEKQALVIQLQK 138
                     79************************************************************************************999986 PP
Sequence ? help Back to Top
Protein Sequence    Length: 249 aa     Download sequence    
MKDKDFQKVK KSNPGKVLDG EEYTQEIMAE PFSSLTEVVT TKKKSKNKRR FSDEQIKSLE  60
LMFESESRLE PRKKLQVARD LGLQPRQVAI WFQNKRARWK SKQLERDYGI LQADYKNLAS  120
KFDSLKKEKQ ALVIQLQKLN DLLKKPKEEG QRCGQGIDGD SDKGEAVKSD SEGQVSLSME  180
RSEHALGVLS DDDSAIKTDY FGLEEEPNLI SMVEPADGSL TSPEDWRSFD SAGLFDQSSS  240
GYQWWDFWS
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G46680.13e-76HD-ZIP family protein