PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022757640.1

Organism

Durio zibethinus

Taxonomic ID

66656

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio

Family

MYB_related

Protein Properties

Length: 732aa MW: 80098.7 Da PI: 6.5869

Description

MYB_related family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022757640.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	50.6	4.4e-16	24	68	1	47
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 r rWT+eE+ ++++a k++G W +I +++g ++t+ q++s+ qk+ XP_022757640.1 24 RERWTEEEHNRFLEALKLYGRA-WQRIEEHIG-TKTAVQIRSHAQKF 68 78****************88.*****.**********98 PP

Sequence ? help Back to Top
Protein Sequence Length: 732 aa Download sequence
MDTYFSGEEL VIKTRKPYTI TKQRERWTEE EHNRFLEALK LYGRAWQRIE EHIGTKTAVQ 60 IRSHAQKFFS KLEKEALAKG MPIGQALDIE IPPPRPKRKP SNPYPRKTGA ATALQVGAKD 120 GKSETPISSL RYKQVLDLEK EPLPERPNGD EKPTHLKENQ DESCSEVFTL LHEANCSSVS 180 SMNKNSIPTS AALRNSCTFR EFVPLLKEDN GTSKASNLEN SCTSYEKSAQ GQRKDELDGA 240 LRTDEMQATQ NYPRHVAVHV LDGSLGTCAQ NPSLDMPFQD SVFHPMGDVH GRPNLFANPA 300 ASATTEHQNN APRSTHQAFP TFHAPFTHVC PNQEDYRSFL HVSSTFSSLI VSNLLQNPAA 360 HAAASFAATF FPYANVESSA DSPACGQGGF PSRQMNSAPS MAAIAAATVA AATAWWAAHG 420 LLPVCAPLHT GFTCAPASTV AVPPKENGQA PAAKTERKDN TDQDLSTQDR QLDPEYSEAL 480 QGQHSALKSP TSLSSDCEES GDAKVRTGVK AADDEKAAEV TEPQDANKTK NRKQVDRSSC 540 GSNTTSSSEV ETDVLEKHEK DKEDSKGADA NHPQVECSNR RGRSSSNLSD SWKEVSEEGR 600 LAFQALFSRE VLPQSFSPPH DGKNKGQQKE NVGEEKQNPN EKSTLDLNSK TLGSCSDQEE 660 DEKNALSRGE NIVEEGLLTI GLGHAKLKAR RTGFKPYKRC SVEAKENRVM NTGSQVEEKG 720 PKRIRLAGEA ST

Sequence ? help Back to Top

Protein Sequence Length: 732 aa Download sequence

MDTYFSGEEL VIKTRKPYTI TKQRERWTEE EHNRFLEALK LYGRAWQRIE EHIGTKTAVQ  60
IRSHAQKFFS KLEKEALAKG MPIGQALDIE IPPPRPKRKP SNPYPRKTGA ATALQVGAKD  120
GKSETPISSL RYKQVLDLEK EPLPERPNGD EKPTHLKENQ DESCSEVFTL LHEANCSSVS  180
SMNKNSIPTS AALRNSCTFR EFVPLLKEDN GTSKASNLEN SCTSYEKSAQ GQRKDELDGA  240
LRTDEMQATQ NYPRHVAVHV LDGSLGTCAQ NPSLDMPFQD SVFHPMGDVH GRPNLFANPA  300
ASATTEHQNN APRSTHQAFP TFHAPFTHVC PNQEDYRSFL HVSSTFSSLI VSNLLQNPAA  360
HAAASFAATF FPYANVESSA DSPACGQGGF PSRQMNSAPS MAAIAAATVA AATAWWAAHG  420
LLPVCAPLHT GFTCAPASTV AVPPKENGQA PAAKTERKDN TDQDLSTQDR QLDPEYSEAL  480
QGQHSALKSP TSLSSDCEES GDAKVRTGVK AADDEKAAEV TEPQDANKTK NRKQVDRSSC  540
GSNTTSSSEV ETDVLEKHEK DKEDSKGADA NHPQVECSNR RGRSSSNLSD SWKEVSEEGR  600
LAFQALFSRE VLPQSFSPPH DGKNKGQQKE NVGEEKQNPN EKSTLDLNSK TLGSCSDQEE  660
DEKNALSRGE NIVEEGLLTI GLGHAKLKAR RTGFKPYKRC SVEAKENRVM NTGSQVEEKG  720
PKRIRLAGEA ST

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G01060.4	1e-135	MYB_related family protein