PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022757641.1

Organism

Durio zibethinus

Taxonomic ID

66656

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio

Family

MYB_related

Protein Properties

Length: 693aa MW: 75677.7 Da PI: 6.5581

Description

MYB_related family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022757641.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	50.7	4.1e-16	24	68	1	47
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 r rWT+eE+ ++++a k++G W +I +++g ++t+ q++s+ qk+ XP_022757641.1 24 RERWTEEEHNRFLEALKLYGRA-WQRIEEHIG-TKTAVQIRSHAQKF 68 78****************88.*****.**********98 PP

Sequence ? help Back to Top
Protein Sequence Length: 693 aa Download sequence
MDTYFSGEEL VIKTRKPYTI TKQRERWTEE EHNRFLEALK LYGRAWQRIE EHIGTKTAVQ 60 IRSHAQKFFS KLEKEALAKG MPIGQALDIE IPPPRPKRKP SNPYPRKTGA ATALQVGAKD 120 GKSETPISSL RYKQVLDLEK EPLPERPNGD EKPTHLKENQ DESCSEVFTL LHEANCSSVS 180 SMNKNSIPTS AALRNSCTFR EFVPLLKEDN GTSKASNLEN SCTSYEKSAQ GQRKDELDGA 240 LRTDEMQATQ NYPRHVAVHV LDGSLGTCAQ NPSLDMPFQD SVFHPMGDVH GRPNLFANPA 300 ASATTEHQNN APRSTHQNPA AHAAASFAAT FFPYANVESS ADSPACGQGG FPSRQMNSAP 360 SMAAIAAATV AAATAWWAAH GLLPVCAPLH TGFTCAPAST VAVPPKENGQ APAAKTERKD 420 NTDQDLSTQD RQLDPEYSEA LQGQHSALKS PTSLSSDCEE SGDAKVRTGV KAADDEKAAE 480 VTEPQDANKT KNRKQVDRSS CGSNTTSSSE VETDVLEKHE KDKEDSKGAD ANHPQVECSN 540 RRGRSSSNLS DSWKEVSEEG RLAFQALFSR EVLPQSFSPP HDGKNKGQQK ENVGEEKQNP 600 NEKSTLDLNS KTLGSCSDQE EDEKNALSRG ENIVEEGLLT IGLGHAKLKA RRTGFKPYKR 660 CSVEAKENRV MNTGSQVEEK GPKRIRLAGE AST

Sequence ? help Back to Top

Protein Sequence Length: 693 aa Download sequence

MDTYFSGEEL VIKTRKPYTI TKQRERWTEE EHNRFLEALK LYGRAWQRIE EHIGTKTAVQ  60
IRSHAQKFFS KLEKEALAKG MPIGQALDIE IPPPRPKRKP SNPYPRKTGA ATALQVGAKD  120
GKSETPISSL RYKQVLDLEK EPLPERPNGD EKPTHLKENQ DESCSEVFTL LHEANCSSVS  180
SMNKNSIPTS AALRNSCTFR EFVPLLKEDN GTSKASNLEN SCTSYEKSAQ GQRKDELDGA  240
LRTDEMQATQ NYPRHVAVHV LDGSLGTCAQ NPSLDMPFQD SVFHPMGDVH GRPNLFANPA  300
ASATTEHQNN APRSTHQNPA AHAAASFAAT FFPYANVESS ADSPACGQGG FPSRQMNSAP  360
SMAAIAAATV AAATAWWAAH GLLPVCAPLH TGFTCAPAST VAVPPKENGQ APAAKTERKD  420
NTDQDLSTQD RQLDPEYSEA LQGQHSALKS PTSLSSDCEE SGDAKVRTGV KAADDEKAAE  480
VTEPQDANKT KNRKQVDRSS CGSNTTSSSE VETDVLEKHE KDKEDSKGAD ANHPQVECSN  540
RRGRSSSNLS DSWKEVSEEG RLAFQALFSR EVLPQSFSPP HDGKNKGQQK ENVGEEKQNP  600
NEKSTLDLNS KTLGSCSDQE EDEKNALSRG ENIVEEGLLT IGLGHAKLKA RRTGFKPYKR  660
CSVEAKENRV MNTGSQVEEK GPKRIRLAGE AST

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G46830.1	1e-100	MYB_related family protein