PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022757705.1

Organism

Durio zibethinus

Taxonomic ID

66656

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio

Family

MYB

Protein Properties

Length: 456aa MW: 51002.5 Da PI: 7.566

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022757705.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	54.3	3e-17	14	61	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 +g W++eEde+l++ ++++G g+W+++++ g+ R++k+c++rw +yl XP_022757705.1 14 KGLWSPEEDEKLLRHITKYGHGCWSSVPKQAGLQRCGKSCRLRWINYL 61 678*******************************************97 PP
2	Myb_DNA-binding	47.5	4.2e-15	67	110	1	46
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46 rg +++eE++l++++++ lG++ W+ Ia+ ++ gRt++++k+ w++ XP_022757705.1 67 RGTFSQEEEKLIIELHAVLGNR-WSQIAAQLP-GRTDNEIKNLWNS 110 899*****************.*****.*********97 PP

Sequence ? help Back to Top
Protein Sequence Length: 456 aa Download sequence
MGRHSCCYKQ KLRKGLWSPE EDEKLLRHIT KYGHGCWSSV PKQAGLQRCG KSCRLRWINY 60 LRPDLKRGTF SQEEEKLIIE LHAVLGNRWS QIAAQLPGRT DNEIKNLWNS CLKKKLRQRG 120 IDPVTHKPLS EVENGEDKSQ QTNNREMASG ASSELNLNTN NPKPGAGLHE QRPTSVTAQG 180 YQLEMEGSSS SKTMNRSNNN SNNNNNLMTS TVSKDFFLDR FATTHHESTT TNSQPSDLVG 240 HLPIQQLNYA SNARLSSTSN PTLWFTQTSK AFDTNSEFSS SSMSTLLPPL TSSFFSAPMG 300 FKPSIIISSD SPSMASFTVN GSRYWETGAS ANNSNSSSST ELQSNSSFFD NNNFSWGLAD 360 CSTSEKEAPI HLMESQAEEI KWPEYLNNPL LMAAALQNQT PQSLYNIDIK SEPYFLTNSS 420 SNSMWPHSQQ QQQEPLQNSD MCAKDIQRLT AAYGHI

Sequence ? help Back to Top

Protein Sequence Length: 456 aa Download sequence

MGRHSCCYKQ KLRKGLWSPE EDEKLLRHIT KYGHGCWSSV PKQAGLQRCG KSCRLRWINY  60
LRPDLKRGTF SQEEEKLIIE LHAVLGNRWS QIAAQLPGRT DNEIKNLWNS CLKKKLRQRG  120
IDPVTHKPLS EVENGEDKSQ QTNNREMASG ASSELNLNTN NPKPGAGLHE QRPTSVTAQG  180
YQLEMEGSSS SKTMNRSNNN SNNNNNLMTS TVSKDFFLDR FATTHHESTT TNSQPSDLVG  240
HLPIQQLNYA SNARLSSTSN PTLWFTQTSK AFDTNSEFSS SSMSTLLPPL TSSFFSAPMG  300
FKPSIIISSD SPSMASFTVN GSRYWETGAS ANNSNSSSST ELQSNSSFFD NNNFSWGLAD  360
CSTSEKEAPI HLMESQAEEI KWPEYLNNPL LMAAALQNQT PQSLYNIDIK SEPYFLTNSS  420
SNSMWPHSQQ QQQEPLQNSD MCAKDIQRLT AAYGHI

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	112	118	LKKKLRQ

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G01680.3	5e-93	MYB family protein