PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022757709.1

Organism

Durio zibethinus

Taxonomic ID

66656

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio

Family

bHLH

Protein Properties

Length: 585aa MW: 63909.5 Da PI: 9.014

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022757709.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	50	5.2e-16	399	445	4	55
HHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS HLH 4 ahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 h++ ErrRRd+iN+++ eL+el+P++ K++Ka++L +A+eY+k Lq XP_022757709.1 399 VHSISERRRRDKINKKMRELQELIPNC-----NKVDKASMLDEAIEYLKTLQ 445 69**********************8.....6****************9 PP

Sequence ? help Back to Top
Protein Sequence Length: 585 aa Download sequence
MAEEQSPESI PPSMTGHLPN LASMCDRDLL ELVWENGQIL VRRLSTKITK RSTNFPCSDY 60 FRDQSSKARI QREGETSTAN RSKDGVADST FGDRLSGLSG LTKLDCHDKN KTNNSLQIGY 120 PELLSELCED GFNVVLGSNK KSYDKQLIDS NIVPVSQFKN FKQSYLSKLA EEIPQQTMQS 180 NREVPQSSLK QYEASIKFMR SNEKKSRIDE KSDRVNFSIF LRPPILLKST HSSCGATRPT 240 SSPSLAGVDE NLEGNAGATP TSNPFEKEGN VMARNMKPIS PDAEPQKESL PDEQSEAVGY 300 KDTPSNTRFP IKDHGPSSSL APNTTIKGNP GNRKPVDLMV ASSSVCSRGA SNCPTYTLKR 360 RYEDTDLSEN NAMEEPEGII KAAPAQGRKG AKTKRKAEVH SISERRRRDK INKKMRELQE 420 LIPNCNKVDK ASMLDEAIEY LKTLQFQAQL MSMGTRVYTP SMMLPSAMQH INAQHLGGFS 480 PMAVGMGMGM QMGLGCGPAQ FPTSLISRAG AGALPGIAEA RLNMLGLPGQ VLLMSMPRSP 540 FVSLAGTFSP QSFQIPGVSQ ADAVQVKIPV ATVPQSTSKV SDPAH

Sequence ? help Back to Top

Protein Sequence Length: 585 aa Download sequence

MAEEQSPESI PPSMTGHLPN LASMCDRDLL ELVWENGQIL VRRLSTKITK RSTNFPCSDY  60
FRDQSSKARI QREGETSTAN RSKDGVADST FGDRLSGLSG LTKLDCHDKN KTNNSLQIGY  120
PELLSELCED GFNVVLGSNK KSYDKQLIDS NIVPVSQFKN FKQSYLSKLA EEIPQQTMQS  180
NREVPQSSLK QYEASIKFMR SNEKKSRIDE KSDRVNFSIF LRPPILLKST HSSCGATRPT  240
SSPSLAGVDE NLEGNAGATP TSNPFEKEGN VMARNMKPIS PDAEPQKESL PDEQSEAVGY  300
KDTPSNTRFP IKDHGPSSSL APNTTIKGNP GNRKPVDLMV ASSSVCSRGA SNCPTYTLKR  360
RYEDTDLSEN NAMEEPEGII KAAPAQGRKG AKTKRKAEVH SISERRRRDK INKKMRELQE  420
LIPNCNKVDK ASMLDEAIEY LKTLQFQAQL MSMGTRVYTP SMMLPSAMQH INAQHLGGFS  480
PMAVGMGMGM QMGLGCGPAQ FPTSLISRAG AGALPGIAEA RLNMLGLPGQ VLLMSMPRSP  540
FVSLAGTFSP QSFQIPGVSQ ADAVQVKIPV ATVPQSTSKV SDPAH

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	394	408	KRKAEVHSISERRRR
2	404	409	ERRRRD
3	405	410	RRRRDK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G09530.2	1e-35	bHLH family protein