PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022757774.1
Organism
Durio zibethinus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio
Family MYB
Protein Properties Length: 293aa    MW: 33373.9 Da    PI: 5.483
Description MYB family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022757774.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding60.82.8e-192370148
                     TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS
  Myb_DNA-binding  1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48
                     +g+WT+eEd  l+ +v+ +G g+W+++ar  g++Rt+k+c++rw++yl
   XP_022757774.1 23 KGPWTEEEDSVLKAYVNIHGEGRWNSVARLSGLRRTGKSCRLRWLNYL 70
                     79********************************************97 PP
2Myb_DNA-binding50.35.6e-1676119146
                      TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS
  Myb_DNA-binding   1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46 
                      rg+ + eE++l+++++ ++G++ W++Ia++++ gRt++++k++w++
   XP_022757774.1  76 RGNISLEEQLLILELHSRWGNR-WSKIAQHLP-GRTDNEIKNYWRT 119
                      78899*****************.*********.***********96 PP
Sequence ? help Back to Top
Protein Sequence    Length: 293 aa     Download sequence    
MDVYERGFIS GTPQSEEEMD VRKGPWTEEE DSVLKAYVNI HGEGRWNSVA RLSGLRRTGK  60
SCRLRWLNYL RPEVRRGNIS LEEQLLILEL HSRWGNRWSK IAQHLPGRTD NEIKNYWRTR  120
VQKQAKQLKC DVNSKQFRDA MRYVWIPRLI ERIRASSKSP SGQPTSTSNT TYTDNISNMT  180
TSQITYANAT GSVQVDPSLL PELSGTSSDS VDTQVSSVSD LTDCYNPQSA SDYPNNLQKG  240
SGLCQENVAG TWGRCVEFQA TEEQSNGWLG GGDSMESVWN EENIWFLQQQ LYD
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G47190.15e-76MYB family protein