PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022758097.1
Organism
Durio zibethinus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio
Family ARF
Protein Properties Length: 711aa    MW: 80241 Da    PI: 7.6427
Description ARF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022758097.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B374.21.5e-23143245199
                     EEEE-..-HHHHTT-EE--HHH.HTT.......---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSS CS
              B3   1 ffkvltpsdvlksgrlvlpkkfaeeh.......ggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrs 88 
                     f k+ltpsd++++g +++pk++a++          +++ +++l+  d++g +W +++i+r++++r++lt+GW+ Fv +++L +gD ++F   + +
  XP_022758097.1 143 FSKKLTPSDTNAHGGFCIPKRHADDGclppldmA-QQTPQQELVAIDLHGFEWHFRHIFRGQPKRHLLTSGWSTFVTSKKLVSGDAFIFL--RGE 234
                     88*********************888*****963.4445569************************************************..449 PP

                     EE..EEEEE-S CS
              B3  89 efelvvkvfrk 99 
                     ++el+v+v+r+
  XP_022758097.1 235 NGELRVGVRRA 245
                     999*****996 PP
2Auxin_resp107.61.3e-35270352183
      Auxin_resp   1 aahaastksvFevvYnPrastseFvvkvekvekalkvkvsvGmRfkmafetedsserrlsGtvvgvsdldpvrWpnSkWrsLk 83 
                     a ha+st+s+F+v+Y+P++s+seF++++++++k+ +  +++G+Rf+m+fe++++ e+r  Gt+++++d+d +rWpnSkWr+Lk
  XP_022758097.1 270 ALHAFSTRSMFTVYYRPWTSSSEFIIPLDQYMKSAQLDYCIGTRFRMQFEGKECGEKRALGTIISIEDVDHIRWPNSKWRCLK 352
                     679******************************************************************************96 PP
Sequence ? help Back to Top
Protein Sequence    Length: 711 aa     Download sequence    
MDGERNVLKA KAPFQSRRRI DVDGLRPPNN QGEKDDLYIK LWHLCAGPSV YVPRAGEKVF  60
YFPQGHLEQI EAYMNEDGTM EMPIYNLPSK ILCRVVHVQL KAEPGTDEVF AQIVLLPEAE  120
QDELSVEHRN YQALPRKAYS RFFSKKLTPS DTNAHGGFCI PKRHADDGCL PPLDMAQQTP  180
QQELVAIDLH GFEWHFRHIF RGQPKRHLLT SGWSTFVTSK KLVSGDAFIF LRGENGELRV  240
GVRRAMTTLN NTSTSVISGH SMRHGILASA LHAFSTRSMF TVYYRPWTSS SEFIIPLDQY  300
MKSAQLDYCI GTRFRMQFEG KECGEKRALG TIISIEDVDH IRWPNSKWRC LKVKWDPTSV  360
AVLHPERLCP WNIDAMEFTN KKKPIILNCP KAARTDDASS PGFSSLLMDG MWHGSVKYES  420
QSSSGVLQGQ EDSDTDANRS SALRQPLPHF LPLNPSWASI QQQMENQLEI QIPVCNSFYQ  480
CTSSTTLFSG GNVASLGLHN KWPPTFSCYG VHDNALASRK VRVPNVNSME WRTLERRNES  540
KTPLCQPNGG HSYMLFGVNL VHGPPELPSP QVVTSSELGS LCSIPPTSQS SVSEPSKGRS  600
STQCKNCCSV SNRSCNKVLK YGTALGRSVD LTRFNGYEDL ICEIDHMFDF KGRLIDGSSD  660
WHVTFTDDEG DMMLIGDYPW QKFQYEVRRM LICPKEEINR LNPSSPNSTS H
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G62000.31e-152ARF family protein