PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022758156.1

Organism

Durio zibethinus

Taxonomic ID

66656

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio

Family

GATA

Protein Properties

Length: 520aa MW: 58149.4 Da PI: 6.8237

Description

GATA family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022758156.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	GATA	50.4	3.1e-16	7	41	1	35
GATA 1 CsnCgttkTplWRrgpdgnktLCnaCGlyyrkkgl 35 C +Cg+t+TplWR+gp ++ LCnaCG ++r kg+ XP_022758156.1 7 CYHCGVTSTPLWRNGPLEKPVLCNACGSRWRTKGT 41 **************99999*********997 PP

Sequence ? help Back to Top
Protein Sequence Length: 520 aa Download sequence
MGKQGPCYHC GVTSTPLWRN GPLEKPVLCN ACGSRWRTKG TLDNYIPLHA RFEPDDYEDH 60 RASRMKSISI NKNKEVKLLK RKPNHDTAVV SPDYNQGFCK FVDEDTSNRS SSGSAISNSE 120 SCAQFGSADA SDLTGPAQSN VWDSMVPSKK RTFVNRPKPS PVEKLTKDLY TILHEQQSSY 180 FSGSSEEDLL LESETPMVSV EIGHGSVLIR HPSSIAREEE SEASSLSVEN KQYSMNESYS 240 HSSNFPAYND SKGIKISGHG IEKAKTAGQG MQHEQLKRDK VQHEKSLMLE SHNSPLCKID 300 LNDILNFEEY VKHLTNEEQQ QLLQYLPPLD IVKLPDSLKS LFASPQFKEN LYYFQQLLEE 360 GVFNISVPGV KAEDCKTLKR LALFNLTKSH WVECRHVLKK CKSSVGGSVI ARGPIAIASN 420 NLVIMKRSRD SQSQNFPEAR TLKSPKRVIM KATYENKELI DNDGSCFSPR SLFALPPDGG 480 SLMLDSLHFV DESSDQDLLL DVPPNGSFPQ AETASFDFKF

Sequence ? help Back to Top

Protein Sequence Length: 520 aa Download sequence

MGKQGPCYHC GVTSTPLWRN GPLEKPVLCN ACGSRWRTKG TLDNYIPLHA RFEPDDYEDH  60
RASRMKSISI NKNKEVKLLK RKPNHDTAVV SPDYNQGFCK FVDEDTSNRS SSGSAISNSE  120
SCAQFGSADA SDLTGPAQSN VWDSMVPSKK RTFVNRPKPS PVEKLTKDLY TILHEQQSSY  180
FSGSSEEDLL LESETPMVSV EIGHGSVLIR HPSSIAREEE SEASSLSVEN KQYSMNESYS  240
HSSNFPAYND SKGIKISGHG IEKAKTAGQG MQHEQLKRDK VQHEKSLMLE SHNSPLCKID  300
LNDILNFEEY VKHLTNEEQQ QLLQYLPPLD IVKLPDSLKS LFASPQFKEN LYYFQQLLEE  360
GVFNISVPGV KAEDCKTLKR LALFNLTKSH WVECRHVLKK CKSSVGGSVI ARGPIAIASN  420
NLVIMKRSRD SQSQNFPEAR TLKSPKRVIM KATYENKELI DNDGSCFSPR SLFALPPDGG  480
SLMLDSLHFV DESSDQDLLL DVPPNGSFPQ AETASFDFKF

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G17570.3	1e-138	GATA family protein