PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022758165.1

Organism

Durio zibethinus

Taxonomic ID

66656

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio

Family

GATA

Protein Properties

Length: 514aa MW: 57611.8 Da PI: 6.5657

Description

GATA family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022758165.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	GATA	35.7	1.2e-11	9	35	9	35
GATA 9 TplWRrgpdgnktLCnaCGlyyrkkgl 35 TplWR+gp ++ LCnaCG ++r kg+ XP_022758165.1 9 TPLWRNGPLEKPVLCNACGSRWRTKGT 35 ******99999*********997 PP

Sequence ? help Back to Top
Protein Sequence Length: 514 aa Download sequence
MSAFEDKCTP LWRNGPLEKP VLCNACGSRW RTKGTLDNYI PLHARFEPDD YEDHRASRMK 60 SISINKNKEV KLLKRKPNHD TAVVSPDYNQ GFCKFVDEDT SNRSSSGSAI SNSESCAQFG 120 SADASDLTGP AQSNVWDSMV PSKKRTFVNR PKPSPVEKLT KDLYTILHEQ QSSYFSGSSE 180 EDLLLESETP MVSVEIGHGS VLIRHPSSIA REEESEASSL SVENKQYSMN ESYSHSSNFP 240 AYNDSKGIKI SGHGIEKAKT AGQGMQHEQL KRDKVQHEKS LMLESHNSPL CKIDLNDILN 300 FEEYVKHLTN EEQQQLLQYL PPLDIVKLPD SLKSLFASPQ FKENLYYFQQ LLEEGVFNIS 360 VPGVKAEDCK TLKRLALFNL TKSHWVECRH VLKKCKSSVG GSVIARGPIA IASNNLVIMK 420 RSRDSQSQNF PEARTLKSPK RVIMKATYEN KELIDNDGSC FSPRSLFALP PDGGSLMLDS 480 LHFVDESSDQ DLLLDVPPNG SFPQAETASF DFKF

Sequence ? help Back to Top

Protein Sequence Length: 514 aa Download sequence

MSAFEDKCTP LWRNGPLEKP VLCNACGSRW RTKGTLDNYI PLHARFEPDD YEDHRASRMK  60
SISINKNKEV KLLKRKPNHD TAVVSPDYNQ GFCKFVDEDT SNRSSSGSAI SNSESCAQFG  120
SADASDLTGP AQSNVWDSMV PSKKRTFVNR PKPSPVEKLT KDLYTILHEQ QSSYFSGSSE  180
EDLLLESETP MVSVEIGHGS VLIRHPSSIA REEESEASSL SVENKQYSMN ESYSHSSNFP  240
AYNDSKGIKI SGHGIEKAKT AGQGMQHEQL KRDKVQHEKS LMLESHNSPL CKIDLNDILN  300
FEEYVKHLTN EEQQQLLQYL PPLDIVKLPD SLKSLFASPQ FKENLYYFQQ LLEEGVFNIS  360
VPGVKAEDCK TLKRLALFNL TKSHWVECRH VLKKCKSSVG GSVIARGPIA IASNNLVIMK  420
RSRDSQSQNF PEARTLKSPK RVIMKATYEN KELIDNDGSC FSPRSLFALP PDGGSLMLDS  480
LHFVDESSDQ DLLLDVPPNG SFPQAETASF DFKF

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G17570.2	1e-125	GATA family protein