PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022758174.1

Organism

Durio zibethinus

Taxonomic ID

66656

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio

Family

GATA

Protein Properties

Length: 488aa MW: 54389.1 Da PI: 6.3495

Description

GATA family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022758174.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	GATA	50.5	2.9e-16	7	41	1	35
GATA 1 CsnCgttkTplWRrgpdgnktLCnaCGlyyrkkgl 35 C +Cg+t+TplWR+gp ++ LCnaCG ++r kg+ XP_022758174.1 7 CYHCGVTSTPLWRNGPLEKPVLCNACGSRWRTKGT 41 **************99999*********997 PP

Sequence ? help Back to Top
Protein Sequence Length: 488 aa Download sequence
MGKQGPCYHC GVTSTPLWRN GPLEKPVLCN ACGSRWRTKG TLDNYIPLHA RFEPDDYEDH 60 RASRMKSISI NKNKEVKLLK RKPNHDTAVV SPDYNQGFCK FVDEDTSNRS SSGSAISNSE 120 SCAQFGSADA SDLTGPAQSN VWDSMSSYFS GSSEEDLLLE SETPMVSVEI GHGSVLIRHP 180 SSIAREEESE ASSLSVENKQ YSMNESYSHS SNFPAYNDSK GIKISGHGIE KAKTAGQGMQ 240 HEQLKRDKVQ HEKSLMLESH NSPLCKIDLN DILNFEEYVK HLTNEEQQQL LQYLPPLDIV 300 KLPDSLKSLF ASPQFKENLY YFQQLLEEGV FNISVPGVKA EDCKTLKRLA LFNLTKSHWV 360 ECRHVLKKCK SSVGGSVIAR GPIAIASNNL VIMKRSRDSQ SQNFPEARTL KSPKRVIMKA 420 TYENKELIDN DGSCFSPRSL FALPPDGGSL MLDSLHFVDE SSDQDLLLDV PPNGSFPQAE 480 TASFDFKF

Sequence ? help Back to Top

Protein Sequence Length: 488 aa Download sequence

MGKQGPCYHC GVTSTPLWRN GPLEKPVLCN ACGSRWRTKG TLDNYIPLHA RFEPDDYEDH  60
RASRMKSISI NKNKEVKLLK RKPNHDTAVV SPDYNQGFCK FVDEDTSNRS SSGSAISNSE  120
SCAQFGSADA SDLTGPAQSN VWDSMSSYFS GSSEEDLLLE SETPMVSVEI GHGSVLIRHP  180
SSIAREEESE ASSLSVENKQ YSMNESYSHS SNFPAYNDSK GIKISGHGIE KAKTAGQGMQ  240
HEQLKRDKVQ HEKSLMLESH NSPLCKIDLN DILNFEEYVK HLTNEEQQQL LQYLPPLDIV  300
KLPDSLKSLF ASPQFKENLY YFQQLLEEGV FNISVPGVKA EDCKTLKRLA LFNLTKSHWV  360
ECRHVLKKCK SSVGGSVIAR GPIAIASNNL VIMKRSRDSQ SQNFPEARTL KSPKRVIMKA  420
TYENKELIDN DGSCFSPRSL FALPPDGGSL MLDSLHFVDE SSDQDLLLDV PPNGSFPQAE  480
TASFDFKF

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G17570.3	1e-112	GATA family protein