PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022758201.1

Organism

Durio zibethinus

Taxonomic ID

66656

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio

Family

bHLH

Protein Properties

Length: 669aa MW: 75043.6 Da PI: 5.1663

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022758201.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	46.4	7e-15	455	501	4	55
HHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS HLH 4 ahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 +h +ErrRR+++N++f+ Lr+l+P +K++Ka+iL ++eY+k+L+ XP_022758201.1 455 NHVLAERRRREKLNERFFILRSLVPFV-----TKMDKASILGDTIEYVKQLR 501 7999********************8.....8***************95 PP

Sequence ? help Back to Top
Protein Sequence Length: 669 aa Download sequence
MAAPPSSRLQ NMLQTAVQSV QWTYSLFWQI CPQQGILIWS DGYYNGAIKT RKTVQPMEVS 60 AEEASLQRSQ QLRELYESLS AGETNQPARR PCAALSPEDL TETEWFYLMC VSFSFPPAVG 120 LPGKAYARRQ HVWLAGANEV DSKTFSRAIL AKVQENLGLV QRVKTFFSDQ SHNANPPPPK 180 PALSEHSTSN PATSSDHTRF HSSSLPPMYA AGDPPVNDNQ EDDDEEEVEE ENDDDDEEEP 240 ESDSAETGRN SSQVPAQITQ AAVAAAGEPS ELMQLDMSED IRLGSPDDAS NNLDSDFHML 300 AVSQSGKQAD QQRRADSFRA ETSRRWQMLQ EPMSNNFQPT SSGPQPLDEL SREDTHYSQT 360 VSTILQGQPT RWAESSSTGY ATYSTQSAFA KWTTRSDHHI HVAVEGMSQW LLKYILFTVP 420 FLHGKYRDEN SPKSRDTDAA ARFRKGTPQD ELSANHVLAE RRRREKLNER FFILRSLVPF 480 VTKMDKASIL GDTIEYVKQL RKKIQELETQ NRRMEAENER SRSADSLQRP SSLKDQRNGV 540 TVSERTRSLG PGPGPDKRKM RIVEGNDGGT KPKTAESPPQ ATVETSVEVS IIESDALLEL 600 QCGYREGLLL DIMQMLREQL RIEITAVQSC LNNGVFVAEL RAKVKDREKG KKVSIMEVKA 660 AINQIIPRF

Sequence ? help Back to Top

Protein Sequence Length: 669 aa Download sequence

MAAPPSSRLQ NMLQTAVQSV QWTYSLFWQI CPQQGILIWS DGYYNGAIKT RKTVQPMEVS  60
AEEASLQRSQ QLRELYESLS AGETNQPARR PCAALSPEDL TETEWFYLMC VSFSFPPAVG  120
LPGKAYARRQ HVWLAGANEV DSKTFSRAIL AKVQENLGLV QRVKTFFSDQ SHNANPPPPK  180
PALSEHSTSN PATSSDHTRF HSSSLPPMYA AGDPPVNDNQ EDDDEEEVEE ENDDDDEEEP  240
ESDSAETGRN SSQVPAQITQ AAVAAAGEPS ELMQLDMSED IRLGSPDDAS NNLDSDFHML  300
AVSQSGKQAD QQRRADSFRA ETSRRWQMLQ EPMSNNFQPT SSGPQPLDEL SREDTHYSQT  360
VSTILQGQPT RWAESSSTGY ATYSTQSAFA KWTTRSDHHI HVAVEGMSQW LLKYILFTVP  420
FLHGKYRDEN SPKSRDTDAA ARFRKGTPQD ELSANHVLAE RRRREKLNER FFILRSLVPF  480
VTKMDKASIL GDTIEYVKQL RKKIQELETQ NRRMEAENER SRSADSLQRP SSLKDQRNGV  540
TVSERTRSLG PGPGPDKRKM RIVEGNDGGT KPKTAESPPQ ATVETSVEVS IIESDALLEL  600
QCGYREGLLL DIMQMLREQL RIEITAVQSC LNNGVFVAEL RAKVKDREKG KKVSIMEVKA  660
AINQIIPRF

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	460	465	ERRRRE
2	461	466	RRRREK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G09820.1	2e-84	bHLH family protein