PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022758287.1

Organism

Durio zibethinus

Taxonomic ID

66656

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio

Family

C2H2

Protein Properties

Length: 432aa MW: 47797.7 Da PI: 9.3473

Description

C2H2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022758287.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-C2H2	17.5	1.2e-05	71	93	1	23
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 ++C++C+k F r nL+ H r H XP_022758287.1 71 FVCEICNKGFQRDQNLQLHRRGH 93 89*******************88 PP
2	zf-C2H2	12.4	0.00047	147	169	1	23
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 +kC++C+k + +s+ k H +t+ XP_022758287.1 147 WKCEKCSKIYAVQSDWKAHSKTC 169 58*****************9998 PP

Sequence ? help Back to Top
Protein Sequence Length: 432 aa Download sequence
MSNSTSLSEE ASFSSGTRVE DFGRLNPIVS TISPQQQPEK IKKKRSLPGN PDPDAEVIAL 60 SPKTLLATNR FVCEICNKGF QRDQNLQLHR RGHNLPWKLK QRNSKEIKKR AYVCPEPTCV 120 HHHPLRALGD LTGIKKHYCR KHGEKKWKCE KCSKIYAVQS DWKAHSKTCG TREYRCDCGT 180 LFSRKDSFVT HRAFCDALAE ETARLSANQL ASTATTNPAL HHLTSHSNPN SSSPFPFQSH 240 ISLHPWVDPT QTSNPNPNNP LHVRPETLHF APFFQEPPPP PKALITSPFQ NLHVNNNPSS 300 NAAMSATPHL SATALLQKAA TVGPIASQIN NYNTNNNNMS SHLSPEFLGF TAGNLATWQK 360 SCERFTRDFL GLTGDHHHNG GGNGNVNVSM NVSDVLAYAG GVELRHLGRD PSQLKPQRFG 420 FAEPASETWG GC

Sequence ? help Back to Top

Protein Sequence Length: 432 aa Download sequence

MSNSTSLSEE ASFSSGTRVE DFGRLNPIVS TISPQQQPEK IKKKRSLPGN PDPDAEVIAL  60
SPKTLLATNR FVCEICNKGF QRDQNLQLHR RGHNLPWKLK QRNSKEIKKR AYVCPEPTCV  120
HHHPLRALGD LTGIKKHYCR KHGEKKWKCE KCSKIYAVQS DWKAHSKTCG TREYRCDCGT  180
LFSRKDSFVT HRAFCDALAE ETARLSANQL ASTATTNPAL HHLTSHSNPN SSSPFPFQSH  240
ISLHPWVDPT QTSNPNPNNP LHVRPETLHF APFFQEPPPP PKALITSPFQ NLHVNNNPSS  300
NAAMSATPHL SATALLQKAA TVGPIASQIN NYNTNNNNMS SHLSPEFLGF TAGNLATWQK  360
SCERFTRDFL GLTGDHHHNG GGNGNVNVSM NVSDVLAYAG GVELRHLGRD PSQLKPQRFG  420
FAEPASETWG GC

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G02670.1	1e-117	C2H2 family protein