PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022758385.1
Organism
Durio zibethinus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio
Family HD-ZIP
Protein Properties Length: 294aa    MW: 33124.2 Da    PI: 7.8742
Description HD-ZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022758385.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Homeobox58.79.6e-19132186256
                     T--SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHH CS
        Homeobox   2 rkRttftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRakek 56 
                     rk+ +++k+q  +Lee F+++++++ +++  LAk+lgL  rqV vWFqNrRa+ k
  XP_022758385.1 132 RKKLRLSKDQSAILEESFKEHNTLNPRQKLALAKQLGLRPRQVEVWFQNRRARTK 186
                     788899***********************************************98 PP
2HD-ZIP_I/II129.61.3e-41132221191
     HD-ZIP_I/II   1 ekkrrlskeqvklLEesFeeeekLeperKvelareLglqprqvavWFqnrRARtktkqlEkdyeaLkraydalkeenerLekeveeLreel 91 
                     +kk+rlsk+q+++LEesF+e+++L+p++K +la++Lgl+prqv+vWFqnrRARtk+kq+E+d+e+Lkr++++l+een+rL+kev+eLr +l
  XP_022758385.1 132 RKKLRLSKDQSAILEESFKEHNTLNPRQKLALAKQLGLRPRQVEVWFQNRRARTKLKQTEVDCEFLKRCCENLTEENRRLHKEVQELR-AL 221
                     69*************************************************************************************9.55 PP
Sequence ? help Back to Top
Protein Sequence    Length: 294 aa     Download sequence    
MMVEKEDLGL SLSLSFPQNH HLNLRPSLVP SSFSSPSGLT LQKPSWNDVS ALSDPNSESF  60
RAETRLFLRG IDVNRLPSTV DCEEEAGVSS PNSTISSVSG KRSERDGDGD EIEIERASSR  120
GISDEEDGDT SRKKLRLSKD QSAILEESFK EHNTLNPRQK LALAKQLGLR PRQVEVWFQN  180
RRARTKLKQT EVDCEFLKRC CENLTEENRR LHKEVQELRA LKLSPQFYMQ MTPPTTLTMC  240
PSCERVAVPP NASSTVDRRS HHMAQTHRRS NPINAWAPAS PIPHGPFDAL RPQS
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1131137SRKKLRL
2181189RRARTKLKQ
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G16780.11e-117HD-ZIP family protein