PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022758410.1
Organism
Durio zibethinus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio
Family MYB_related
Protein Properties Length: 326aa    MW: 35623.3 Da    PI: 6.7918
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022758410.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding37.26.8e-1293137347
                      SS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS
  Myb_DNA-binding   3 rWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 
                      +WT+eE+  ++ + ++lG+g+W+ I+r     Rt+ q+ s+ qky
   XP_022758410.1  93 PWTEEEHRMFLLGLQKLGKGDWRGISRNYVISRTPTQVASHAQKY 137
                      8*****************************89************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 326 aa     Download sequence    
MARRCSHCSH NGHNSRTCPN RGVKLFGVRL TDGSIRKSAS MGNLSQYSGL NSGAHYENGS  60
GTPCEGPDHA DGYASEDFVP GSSSSRERKK GVPWTEEEHR MFLLGLQKLG KGDWRGISRN  120
YVISRTPTQV ASHAQKYFIR QSNVSRRKRR SSLFDIAADE LVDTPMVSQD LFSANQPLAE  180
TQSNDQLHVP PPLDEEDESM DSNNSNDGET VPPKSEGLQP CYPLVYSYFP QFFPFSFPYW  240
MGYNTEPTQK DSHEVVKPKA VHSKSPINVD ELVGMSKLSL GESIGDGGSS SLSLKLDGSS  300
RQSAFHANDA SGNASMSSSG SPIHAV
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G47390.11e-108MYB_related family protein