PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022758596.1

Organism

Durio zibethinus

Taxonomic ID

66656

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio

Family

bHLH

Protein Properties

Length: 576aa MW: 62800.3 Da PI: 6.515

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022758596.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	49.1	9.9e-16	350	396	4	55
HHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS HLH 4 ahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 hn ErrRRdriN+++ L+el+P + K +Ka++L +A+eY+ksLq XP_022758596.1 350 VHNLSERRRRDRINEKMRALQELIPRC-----NKSDKASMLDEAIEYLKSLQ 396 6***********************8.....6****************9 PP

Sequence ? help Back to Top
Protein Sequence Length: 576 aa Download sequence
MNHCVPDFEM EEDYSILSSS SLTRPKKPSM PEDEIMELLW QNGQVVMQSQ NHRSFKKYTP 60 FKFHDADQSA PREIRSSSSL QHQQQQQQQQ SITDHLFMQE DEMASWLHYP LSDANFDHDF 120 CADLLYPSSS AAAPAVAPSV TSTATTSAPP PLGRVSQVSG SASAMASASR PPIPPERRNE 180 LESTRIQNFV HFSRHKTARA EQSGPSNSKS LVRESTVVDS SDTPAVAPES AASQVMPSNT 240 EEASGGNNNN ACANMSAAAV VNTQSAAVSV GASKDNLATC EVTVTSSPGG SSASAEPTAQ 300 KAAPAEDRKR KGREPDDAEC HSEDAEFEST DTKKQTRGSI STKRSRAAEV HNLSERRRRD 360 RINEKMRALQ ELIPRCNKSD KASMLDEAIE YLKSLQLQVQ MMSMGCGMVP MMFPGVQQYM 420 PTIGMGIGMG MGMDMGISRP MMPFPNVLAG LALPTPAAAA HLGPRFPIPA FHMPPPVPAP 480 NNQPDATINQ LGMQNTNQPR VLNFADPYQQ YIGLHQIQLP PPLSRAMAQT SSNKPSNSRE 540 AENLENQPPE SERGLDRRIS DKKTKPSLGT WGTVVR

Sequence ? help Back to Top

Protein Sequence Length: 576 aa Download sequence

MNHCVPDFEM EEDYSILSSS SLTRPKKPSM PEDEIMELLW QNGQVVMQSQ NHRSFKKYTP  60
FKFHDADQSA PREIRSSSSL QHQQQQQQQQ SITDHLFMQE DEMASWLHYP LSDANFDHDF  120
CADLLYPSSS AAAPAVAPSV TSTATTSAPP PLGRVSQVSG SASAMASASR PPIPPERRNE  180
LESTRIQNFV HFSRHKTARA EQSGPSNSKS LVRESTVVDS SDTPAVAPES AASQVMPSNT  240
EEASGGNNNN ACANMSAAAV VNTQSAAVSV GASKDNLATC EVTVTSSPGG SSASAEPTAQ  300
KAAPAEDRKR KGREPDDAEC HSEDAEFEST DTKKQTRGSI STKRSRAAEV HNLSERRRRD  360
RINEKMRALQ ELIPRCNKSD KASMLDEAIE YLKSLQLQVQ MMSMGCGMVP MMFPGVQQYM  420
PTIGMGIGMG MGMDMGISRP MMPFPNVLAG LALPTPAAAA HLGPRFPIPA FHMPPPVPAP  480
NNQPDATINQ LGMQNTNQPR VLNFADPYQQ YIGLHQIQLP PPLSRAMAQT SSNKPSNSRE  540
AENLENQPPE SERGLDRRIS DKKTKPSLGT WGTVVR

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	355	360	ERRRRD

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G20180.2	9e-63	bHLH family protein