PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022758939.1
Organism
Durio zibethinus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio
Family GRAS
Protein Properties Length: 535aa    MW: 60280.2 Da    PI: 6.3097
Description GRAS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022758939.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GRAS452.23.3e-1381655351374
            GRAS   1 lvelLlecAeavssgdlelaqalLarlselaspdgdpmqRlaayfteALaarlarsvselykalppsetseknsseelaalklfsevsPilkfsh 95 
                     l+++L+ cA+avs++dl +aq+l+ +l++++s +g+p+qRl ay++e+L arla+s+s++ykal+++e +   +++ l+++++++ev+P++kf++
  XP_022758939.1 165 LKQVLVYCAKAVSDNDLLMAQWLMDELRQMVSVSGEPIQRLGAYMLEGLVARLASSGSSIYKALRCKEPA---TADLLSYMHILYEVCPYFKFGY 256
                     5799*****************************************************************9...89******************** PP

            GRAS  96 ltaNqaIleavegeervHiiDfdisqGlQWpaLlqaLasRpegppslRiTgvgspesg..skeeleetgerLakfAeelgvpfefnvlvakrled 188
                     + aN aI ea++ e++vHiiDf+i qG QW++L+qa+a+Rp+gpp++RiT ++ ++s   +   l+ +g+rL+k+A++++vpfef++ ++ +  d
  XP_022758939.1 257 MSANGAIAEAMKDEDKVHIIDFQIAQGSQWITLIQAFAARPGGPPHIRITSIDYATSAyaHGGGLNIVGKRLSKLAKHFKVPFEFHA-ATLSGCD 350
                     ******************************************************99889999*************************.888999* PP

            GRAS 189 leleeLrvkpgEalaVnlvlqlhrlldesvsleserdevLklvkslsPkvvvvveqeadhnsesFlerflealeyysalfdsleaklpreseeri 283
                     ++ e+L+v+pgEalaVn++++lh+++desvs+e++rd++L+lvkslsPkvv++veqe+++n+++F+ rfle+l+yy+a+f+s++++lpre++eri
  XP_022758939.1 351 VQQEHLQVRPGEALAVNFAFMLHHMPDESVSTENHRDRLLRLVKSLSPKVVTLVEQESNTNTAPFFPRFLETLNYYTAIFESIDMTLPREHKERI 445
                     *********************************************************************************************** PP

            GRAS 284 kvErellgreivnvvacegaerrerhetlekWrerleeaGFkpvplsekaakqaklllrkvksdgyrveeesgslvlgWkdrpLvsvSaWr 374
                     +vE+++l+r++vn++aceg er+er+e l+kWr+r+++aGF+p+pls+ +++++k+l +++  d y++ee++g+l+lgW++r Lv+ +aW+
  XP_022758939.1 446 NVEQHCLARDVVNIIACEGPERVERRELLGKWRSRFRMAGFTPYPLSSLVNATIKTLHENYC-DKYTLEERDGALYLGWMNRDLVASCAWK 535
                     **********************************************************9999.55*************************8 PP
Sequence ? help Back to Top
Protein Sequence    Length: 535 aa     Download sequence    
MQASQQHRSS VMASGLYHQV KQEVEPFYFS QFPTIDHSLC YNDSNHESHF SVRNSCEHYC  60
TLESSSANCS YTVYNSSAVS FSPNGSRTQQ ESQSYPSDLH HSADNTYGSP ISGSCITEDV  120
SDLRDKLRKL ETVMLGPDSD IIDSITSPEM DSWRLVTDAI SRGDLKQVLV YCAKAVSDND  180
LLMAQWLMDE LRQMVSVSGE PIQRLGAYML EGLVARLASS GSSIYKALRC KEPATADLLS  240
YMHILYEVCP YFKFGYMSAN GAIAEAMKDE DKVHIIDFQI AQGSQWITLI QAFAARPGGP  300
PHIRITSIDY ATSAYAHGGG LNIVGKRLSK LAKHFKVPFE FHAATLSGCD VQQEHLQVRP  360
GEALAVNFAF MLHHMPDESV STENHRDRLL RLVKSLSPKV VTLVEQESNT NTAPFFPRFL  420
ETLNYYTAIF ESIDMTLPRE HKERINVEQH CLARDVVNII ACEGPERVER RELLGKWRSR  480
FRMAGFTPYP LSSLVNATIK TLHENYCDKY TLEERDGALY LGWMNRDLVA SCAWK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G48150.10.0GRAS family protein