PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022759168.1

Organism

Durio zibethinus

Taxonomic ID

66656

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio

Family

MIKC_MADS

Protein Properties

Length: 244aa MW: 27864.7 Da PI: 8.6878

Description

MIKC_MADS family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022759168.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	SRF-TF	99.4	1.4e-31	9	59	1	51
S---SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSEEEEEE- CS SRF-TF 1 krienksnrqvtfskRrngilKKAeELSvLCdaevaviifsstgklyeyss 51 krienk+nrqvtf+kRrng+lKKA+ELSvLCdaeva+iifs++gklye++s XP_022759168.1 9 KRIENKINRQVTFAKRRNGLLKKAYELSVLCDAEVALIIFSTRGKLYEFCS 59 79***********************************************96 PP
2	K-box	101.8	9.5e-34	82	174	8	100
K-box 8 sleeakaeslqqelakLkkeienLqreqRhllGedLesLslkeLqqLeqqLekslkkiRskKnellleqieelqkkekelqeenkaLrkklee 100 + +++ ++s++qe+ kLk++ e Lqr+qR+llGedL++L+ keL+qLe+qLe+slk++Rs+K++++l+q+++lq+ke++l e+n+aL++kl+e XP_022759168.1 82 KPAKELEQSSYQEYLKLKARCEALQRTQRNLLGEDLGPLNSKELEQLERQLESSLKHVRSTKTQYMLDQLSDLQNKEQMLMEANRALSMKLDE 174 456677899*********************************************************************************986 PP

Sequence ? help Back to Top
Protein Sequence Length: 244 aa Download sequence
MGRGRVELKR IENKINRQVT FAKRRNGLLK KAYELSVLCD AEVALIIFST RGKLYEFCSS 60 ASMLKTLDRY QKCSYGAVEV SKPAKELEQS SYQEYLKLKA RCEALQRTQR NLLGEDLGPL 120 NSKELEQLER QLESSLKHVR STKTQYMLDQ LSDLQNKEQM LMEANRALSM KLDEISARNQ 180 FRASWEGGEQ SVSFNNQQAQ SQELFQPLEC NPTLQIGYNP VASDQIAATS HAQQVNGFIP 240 GWML

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G15800.1	1e-119	MIKC_MADS family protein