PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022759170.1

Organism

Durio zibethinus

Taxonomic ID

66656

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio

Family

MIKC_MADS

Protein Properties

Length: 243aa MW: 27736.6 Da PI: 8.6878

Description

MIKC_MADS family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022759170.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	SRF-TF	99.4	1.4e-31	9	59	1	51
S---SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSEEEEEE- CS SRF-TF 1 krienksnrqvtfskRrngilKKAeELSvLCdaevaviifsstgklyeyss 51 krienk+nrqvtf+kRrng+lKKA+ELSvLCdaeva+iifs++gklye++s XP_022759170.1 9 KRIENKINRQVTFAKRRNGLLKKAYELSVLCDAEVALIIFSTRGKLYEFCS 59 79***********************************************96 PP
2	K-box	102.5	5.7e-34	82	173	9	100
K-box 9 leeakaeslqqelakLkkeienLqreqRhllGedLesLslkeLqqLeqqLekslkkiRskKnellleqieelqkkekelqeenkaLrkklee 100 + +++ es++qe+ kLk++ e Lqr+qR+llGedL++L+ keL+qLe+qLe+slk++Rs+K++++l+q+++lq+ke++l e+n+aL++kl+e XP_022759170.1 82 KPAKELESSYQEYLKLKARCEALQRTQRNLLGEDLGPLNSKELEQLERQLESSLKHVRSTKTQYMLDQLSDLQNKEQMLMEANRALSMKLDE 173 4567899**********************************************************************************986 PP

Sequence ? help Back to Top
Protein Sequence Length: 243 aa Download sequence
MGRGRVELKR IENKINRQVT FAKRRNGLLK KAYELSVLCD AEVALIIFST RGKLYEFCSS 60 ASMLKTLDRY QKCSYGAVEV SKPAKELESS YQEYLKLKAR CEALQRTQRN LLGEDLGPLN 120 SKELEQLERQ LESSLKHVRS TKTQYMLDQL SDLQNKEQML MEANRALSMK LDEISARNQF 180 RASWEGGEQS VSFNNQQAQS QELFQPLECN PTLQIGYNPV ASDQIAATSH AQQVNGFIPG 240 WML

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G15800.1	1e-121	MIKC_MADS family protein