PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022759171.1
Organism
Durio zibethinus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio
Family MIKC_MADS
Protein Properties Length: 245aa    MW: 28167 Da    PI: 10.207
Description MIKC_MADS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022759171.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1SRF-TF93.78.3e-301059251
                    ---SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSEEEEEE- CS
          SRF-TF  2 rienksnrqvtfskRrngilKKAeELSvLCdaevaviifsstgklyeyss 51
                    rienk+ rqvtfskRr+g+lKKA+E+SvLCdaeva+i+fs++gkl+eyss
  XP_022759171.1 10 RIENKISRQVTFSKRRTGLLKKAHEISVLCDAEVALIVFSNRGKLFEYSS 59
                    8***********************************************96 PP
2K-box94.61.6e-31751741100
           K-box   1 yqkssgksleeakaeslqqelakLkkeienLqreqRhllGedLesLslkeLqqLeqqLekslkkiRskKnellleqieelqkkekelqeenkaLr 95 
                     y++++  s++++ +++++ e  kLk+ ie+Lqr++R++lGe+L++Lsl++Lq Leqq+++slk+iR++Kn+l+ e+i+elqkkek lq++n +L 
  XP_022759171.1  75 YAERQLISNDSESQANWSLECPKLKSTIESLQRNLRQFLGEELDPLSLRDLQLLEQQIHNSLKRIRTRKNKLMNESISELQKKEKTLQDQNSKLA 169
                     56778888889999********************************************************************************* PP

           K-box  96 kklee 100
                     kkl+e
  XP_022759171.1 170 KKLKE 174
                     **986 PP
Sequence ? help Back to Top
Protein Sequence    Length: 245 aa     Download sequence    
MGRGRVQLRR IENKISRQVT FSKRRTGLLK KAHEISVLCD AEVALIVFSN RGKLFEYSSD  60
SSIERILERH EQHSYAERQL ISNDSESQAN WSLECPKLKS TIESLQRNLR QFLGEELDPL  120
SLRDLQLLEQ QIHNSLKRIR TRKNKLMNES ISELQKKEKT LQDQNSKLAK KLKENEKIPT  180
EHAQCEQQNL AQNSPPQPAA TIQFPSLTIG GTFQAIEGTN KGAETQPQPS TNTVIPPWML  240
RHVHR
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G26310.11e-78MIKC_MADS family protein