PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022759285.1
Organism
Durio zibethinus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio
Family M-type_MADS
Protein Properties Length: 284aa    MW: 33007 Da    PI: 8.9832
Description M-type_MADS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022759285.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1SRF-TF49.84.4e-16948140
                    S---SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE CS
          SRF-TF  1 krienksnrqvtfskRrngilKKAeELSvLCdaevaviif 40
                    k ien+  r+  f kRrn +lKKA+ELS+LCd+++++ii+
  XP_022759285.1  9 KLIENEKARKKVFEKRRNNLLKKAKELSILCDIKILLIIY 48
                    569************************************8 PP
Sequence ? help Back to Top
Protein Sequence    Length: 284 aa     Download sequence    
MGRRRMEMKL IENEKARKKV FEKRRNNLLK KAKELSILCD IKILLIIYEL DKQRPQIWPG  60
NEEEAEQIIN RFKQQLVRGD WKTACESFSS KKNRFDGKFA ISDYKSMINH CSKNELQKLC  120
YQLDGKIAAV MNAIKSKQVL TEGPRSPKIL PDSQGIGFLD KERGKEVVIY QEPVHDIQRG  180
QSFQMLSHNP KFMESPMMMT TMMQNGISYP EFDGSSSNSS NIPYVPLPID YVHPSWMPPA  240
YIDPNFSMSY YDPNSYHIAP GLHYPMVPSF PSEWNASDQP FFLY
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G03060.21e-13M-type_MADS family protein