PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022759399.1
Organism
Durio zibethinus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio
Family ARF
Protein Properties Length: 832aa    MW: 92173.8 Da    PI: 6.2332
Description ARF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022759399.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B371.88.5e-23127227198
                     EEEE-..-HHHHTT-EE--HHH.HTT.......---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSS CS
              B3   1 ffkvltpsdvlksgrlvlpkkfaeeh.......ggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrs 88 
                     f+k+lt sd++++g +++p++ ae+        +++++  ++l+ +d++  +W++++i+r++++r++lt+GW+ Fv+a++L +gD+v+F   +++
  XP_022759399.1 127 FCKTLTASDTSTHGGFSVPRRAAEKVfppldfsQQPPA--QELIARDLHDVEWKFRHIFRGQPKRHLLTTGWSVFVSAKRLVAGDSVLFI--WNE 217
                     99*****************************8544444..48************************************************..888 PP

                     EE..EEEEE- CS
              B3  89 efelvvkvfr 98 
                     + +l+++++ 
  XP_022759399.1 218 KNQLLLGIRH 227
                     8889999986 PP
2Auxin_resp1187.7e-39253336183
      Auxin_resp   1 aahaastksvFevvYnPrastseFvvkvekvekalk.vkvsvGmRfkmafetedsserrlsGtvvgvsdldpvrWpnSkWrsLk 83 
                     aahaa+t+s F+v+YnPras+seFv++++k++ka+  ++v vGmRf+m fete+ss rr++Gt++g+sdldpvrWpnS+Wrs+k
  XP_022759399.1 253 AAHAAATNSCFTVFYNPRASPSEFVIPLSKYVKAVFhTRVLVGMRFRMLFETEESSVRRYMGTITGISDLDPVRWPNSHWRSVK 336
                     79********************************87599******************************************985 PP
Sequence ? help Back to Top
Protein Sequence    Length: 832 aa     Download sequence    
MKLSASGLGQ QAYEGENKCL NSELWHACAG PLVCLPTVGS RVVYFPQGHS EQVAATTNKE  60
VDAHIPNYPN LPPQLICQLH NVTMHADVET DEVYAQMTLQ PLTPEEQKDT FLPMDLGVPS  120
KQPTNYFCKT LTASDTSTHG GFSVPRRAAE KVFPPLDFSQ QPPAQELIAR DLHDVEWKFR  180
HIFRGQPKRH LLTTGWSVFV SAKRLVAGDS VLFIWNEKNQ LLLGIRHATR PQTVMPSSVL  240
SSDSMHIGLL AAAAHAAATN SCFTVFYNPR ASPSEFVIPL SKYVKAVFHT RVLVGMRFRM  300
LFETEESSVR RYMGTITGIS DLDPVRWPNS HWRSVKVGWD ESTAGERQPR VSLWEIEPLT  360
TFPMYPSLFP LRLKRPWHPG SSSLHDNRDD ISNGLMWLRG GSGEQGLHSL NLQSFSSFSW  420
MQQRLDPSFP GNDHNLQYQA MLANGMQNLG SGDPLRQPLQ QSLQFVQQPG SHNLLLQQQL  480
AVSQSVPHNI VQAQSQILNL PPVLGQEQVG TLPEEQAQQQ HNIIQSDQLQ QRQPTNMPQS  540
FLKTDFIDSA KVSGSVPPVQ NMLGSLCPES SANLLNFSRT GQSMPADQLP QQSWAPKYAH  600
SQVITFASST SFPQVFPGKD AIKEPEIGHS DAQNSALFGV NNNSYGLPLP TVMPGFATSS  660
SEADVPSIPL GDPSFQNPLY GCMQDSSELR STGQVDPLNP TPTFVKVYKS GSVGRSVDIS  720
RFSSYHELRE ELAQKFGIEG KLEDPLRSGW QLVFVDREND ILLLGDDPWE AFVNNVWYIK  780
ILSAEDVQKM GEQRVEPFSP TPGQRMNSSG TATASGGRDY VSGLSSVGSL EY
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G37020.10.0ARF family protein