PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022759400.1

Organism

Durio zibethinus

Taxonomic ID

66656

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio

Family

ARF

Protein Properties

Length: 801aa MW: 88887.2 Da PI: 6.3316

Description

ARF family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022759400.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	B3	71.9	8.1e-23	127	227	1	98
EEEE-..-HHHHTT-EE--HHH.HTT.......---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSS CS B3 1 ffkvltpsdvlksgrlvlpkkfaeeh.......ggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrs 88 f+k+lt sd++++g +++p++ ae+ +++++ ++l+ +d++ +W++++i+r++++r++lt+GW+ Fv+a++L +gD+v+F +++ XP_022759400.1 127 FCKTLTASDTSTHGGFSVPRRAAEKVfppldfsQQPPA--QELIARDLHDVEWKFRHIFRGQPKRHLLTTGWSVFVSAKRLVAGDSVLFI--WNE 217 99***************************8544444..48**********************************************..888 PP EE..EEEEE- CS B3 89 efelvvkvfr 98 + +l+++++ XP_022759400.1 218 KNQLLLGIRH 227 8889999986 PP
2	Auxin_resp	118.1	7.3e-39	253	336	1	83
Auxin_resp 1 aahaastksvFevvYnPrastseFvvkvekvekalk.vkvsvGmRfkmafetedsserrlsGtvvgvsdldpvrWpnSkWrsLk 83 aahaa+t+s F+v+YnPras+seFv++++k++ka+ ++v vGmRf+m fete+ss rr++Gt++g+sdldpvrWpnS+Wrs+k XP_022759400.1 253 AAHAAATNSCFTVFYNPRASPSEFVIPLSKYVKAVFhTRVLVGMRFRMLFETEESSVRRYMGTITGISDLDPVRWPNSHWRSVK 336 79******************************87599****************************************985 PP

Sequence ? help Back to Top
Protein Sequence Length: 801 aa Download sequence
MKLSASGLGQ QAYEGENKCL NSELWHACAG PLVCLPTVGS RVVYFPQGHS EQVAATTNKE 60 VDAHIPNYPN LPPQLICQLH NVTMHADVET DEVYAQMTLQ PLTPEEQKDT FLPMDLGVPS 120 KQPTNYFCKT LTASDTSTHG GFSVPRRAAE KVFPPLDFSQ QPPAQELIAR DLHDVEWKFR 180 HIFRGQPKRH LLTTGWSVFV SAKRLVAGDS VLFIWNEKNQ LLLGIRHATR PQTVMPSSVL 240 SSDSMHIGLL AAAAHAAATN SCFTVFYNPR ASPSEFVIPL SKYVKAVFHT RVLVGMRFRM 300 LFETEESSVR RYMGTITGIS DLDPVRWPNS HWRSVKVGWD ESTAGERQPR VSLWEIEPLT 360 TFPMYPSLFP LRLKRPWHPG SSSLHDNRDD ISNGLMWLRG GSGEQGLHSL NLQSFSSFSW 420 MQQRLDPSFP GNDHNLQYQA MLANGMQNLG SGDPLRQPLQ QSLQFVQQPG SHNLLLQQQL 480 AVSQSVPHNI VQAQSQILNL PPVLGQEQVG TLPEEQAQQQ HNIIQSDQLQ QRQPTNMPQS 540 FLKTDFIDSA KVSGSVPPVQ NMLGSLCPES SANLLNFSRT GQSMPADQLP QQSWAPKYAH 600 SQNSALFGVN NNSYGLPLPT VMPGFATSSS EADVPSIPLG DPSFQNPLYG CMQDSSELRS 660 TGQVDPLNPT PTFVKVYKSG SVGRSVDISR FSSYHELREE LAQKFGIEGK LEDPLRSGWQ 720 LVFVDRENDI LLLGDDPWEA FVNNVWYIKI LSAEDVQKMG EQRVEPFSPT PGQRMNSSGT 780 ATASGGRDYV SGLSSVGSLE Y

Sequence ? help Back to Top

Protein Sequence Length: 801 aa Download sequence

MKLSASGLGQ QAYEGENKCL NSELWHACAG PLVCLPTVGS RVVYFPQGHS EQVAATTNKE  60
VDAHIPNYPN LPPQLICQLH NVTMHADVET DEVYAQMTLQ PLTPEEQKDT FLPMDLGVPS  120
KQPTNYFCKT LTASDTSTHG GFSVPRRAAE KVFPPLDFSQ QPPAQELIAR DLHDVEWKFR  180
HIFRGQPKRH LLTTGWSVFV SAKRLVAGDS VLFIWNEKNQ LLLGIRHATR PQTVMPSSVL  240
SSDSMHIGLL AAAAHAAATN SCFTVFYNPR ASPSEFVIPL SKYVKAVFHT RVLVGMRFRM  300
LFETEESSVR RYMGTITGIS DLDPVRWPNS HWRSVKVGWD ESTAGERQPR VSLWEIEPLT  360
TFPMYPSLFP LRLKRPWHPG SSSLHDNRDD ISNGLMWLRG GSGEQGLHSL NLQSFSSFSW  420
MQQRLDPSFP GNDHNLQYQA MLANGMQNLG SGDPLRQPLQ QSLQFVQQPG SHNLLLQQQL  480
AVSQSVPHNI VQAQSQILNL PPVLGQEQVG TLPEEQAQQQ HNIIQSDQLQ QRQPTNMPQS  540
FLKTDFIDSA KVSGSVPPVQ NMLGSLCPES SANLLNFSRT GQSMPADQLP QQSWAPKYAH  600
SQNSALFGVN NNSYGLPLPT VMPGFATSSS EADVPSIPLG DPSFQNPLYG CMQDSSELRS  660
TGQVDPLNPT PTFVKVYKSG SVGRSVDISR FSSYHELREE LAQKFGIEGK LEDPLRSGWQ  720
LVFVDRENDI LLLGDDPWEA FVNNVWYIKI LSAEDVQKMG EQRVEPFSPT PGQRMNSSGT  780
ATASGGRDYV SGLSSVGSLE Y

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G37020.1	0.0	ARF family protein