PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022759492.1

Organism

Durio zibethinus

Taxonomic ID

66656

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio

Family

SBP

Protein Properties

Length: 417aa MW: 46106.3 Da PI: 7.5798

Description

SBP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022759492.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	SBP	129.7	1e-40	180	257	1	78
--SSTT-----TT--HHHHHTT--HHHHT-S-EEETTEEEEE-TTTSSEEETTT--SS--S-STTTT-------S--- CS SBP 1 lCqvegCeadlseakeyhrrhkvCevhskapvvlvsgleqrfCqqCsrfhelsefDeekrsCrrrLakhnerrrkkqa 78 +CqvegC++ l +ak+yhrrhkvCe+hskap+v+v gleqrfCqqCsrfh +sefD++krsCrrrLa+hnerrrk+++ XP_022759492.1 180 RCQVEGCHVALVNAKDYHRRHKVCEMHSKAPKVVVLGLEQRFCQQCSRFHVVSEFDDSKRSCRRRLAGHNERRRKSSH 257 6**************************************************************************976 PP

Sequence ? help Back to Top
Protein Sequence Length: 417 aa Download sequence
MENGGHMFMG NRGQTGNNNI NLAWDIRELN PTTTRFDWGS NNNTSSFNLY ATATSTTPSV 60 TRAQTTSSST LPEANTAHAL MYLPHQGNAT LAHHLNQQHS LYTGDGSHMH PDPHLVCLKL 120 GKRQYFEDST ALTERHMADG FSIGKKGKPY YNNHGGDGGN AVVGPSSSTA MMGPPATVPR 180 CQVEGCHVAL VNAKDYHRRH KVCEMHSKAP KVVVLGLEQR FCQQCSRFHV VSEFDDSKRS 240 CRRRLAGHNE RRRKSSHDSA SRNSAQDNKL MTGRFPYLSS QTECALSLLS PRADSWISPS 300 DLSSRSSAAL RELIAENRAA ILARQLILDR DWHLHHHAME DLGEAHPGSS SIAVQQHHSL 360 PEPHGWDRFP ETGAQVTLDL MQASSSAFGM LSVRGKAKEE EEECSELWNS LEGTHVL

Sequence ? help Back to Top

Protein Sequence Length: 417 aa Download sequence

MENGGHMFMG NRGQTGNNNI NLAWDIRELN PTTTRFDWGS NNNTSSFNLY ATATSTTPSV  60
TRAQTTSSST LPEANTAHAL MYLPHQGNAT LAHHLNQQHS LYTGDGSHMH PDPHLVCLKL  120
GKRQYFEDST ALTERHMADG FSIGKKGKPY YNNHGGDGGN AVVGPSSSTA MMGPPATVPR  180
CQVEGCHVAL VNAKDYHRRH KVCEMHSKAP KVVVLGLEQR FCQQCSRFHV VSEFDDSKRS  240
CRRRLAGHNE RRRKSSHDSA SRNSAQDNKL MTGRFPYLSS QTECALSLLS PRADSWISPS  300
DLSSRSSAAL RELIAENRAA ILARQLILDR DWHLHHHAME DLGEAHPGSS SIAVQQHHSL  360
PEPHGWDRFP ETGAQVTLDL MQASSSAFGM LSVRGKAKEE EEECSELWNS LEGTHVL

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G27370.3	5e-38	SBP family protein