PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022759503.1
Organism
Durio zibethinus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio
Family YABBY
Protein Properties Length: 213aa    MW: 23555.9 Da    PI: 8.2451
Description YABBY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022759503.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1YABBY2467e-76111772170
           YABBY   2 dvfssseqvCyvqCnfCntilavsvPstslfkvvtvrCGhCtsllsvnlakasqllaaeshldeslkee..lleelkveeenlksnvekeesast 94 
                     d+ s s+q+Cyv+CnfC+t+lavsvPstslfk+vtvrCGhCt+llsvn++      a + hl++s+  +  llee +++   +++ + + +   +
  XP_022759503.1  11 DHLSPSDQLCYVHCNFCDTVLAVSVPSTSLFKTVTVRCGHCTNLLSVNMRGLLLPAANQLHLGHSFFTPqnLLEEIRSS-APTNMLTNQPNP--N 102
                     78899*****************************************999998888888889999987662344444432.223333333333..3 PP

           YABBY  95 svsseklsenedeevprvppvirPPekrqrvPsaynrfikeeiqrikasnPdishreafsaaaknWahfPkihfgl 170
                     +  +    +   ee+p++p v+rPPekrqrvPsaynrfik+eiqrika+nPdishreafsaaaknWahfP+ihfgl
  XP_022759503.1 103 DSVMP-AIRGGVEEIPKPPVVNRPPEKRQRVPSAYNRFIKDEIQRIKAGNPDISHREAFSAAAKNWAHFPHIHFGL 177
                     33333.3568899****999******************************************************97 PP
Sequence ? help Back to Top
Protein Sequence    Length: 213 aa     Download sequence    
MSSSSAAFSP DHLSPSDQLC YVHCNFCDTV LAVSVPSTSL FKTVTVRCGH CTNLLSVNMR  60
GLLLPAANQL HLGHSFFTPQ NLLEEIRSSA PTNMLTNQPN PNDSVMPAIR GGVEEIPKPP  120
VVNRPPEKRQ RVPSAYNRFI KDEIQRIKAG NPDISHREAF SAAAKNWAHF PHIHFGLMPD  180
QPLKKTSIRQ QEGEEVLMKD GFFAPTNVGV TPY
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G45190.11e-100YABBY family protein