PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022759512.1
Organism
Durio zibethinus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio
Family LBD
Protein Properties Length: 203aa    MW: 22364.5 Da    PI: 8.5765
Description LBD family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022759512.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1DUF260131.24.2e-4191091100
          DUF260   1 aCaaCkvlrrkCakdCvlapyfpaeq.pkkfanvhklFGasnvlkllkalpeeeredamsslvyeAearardPvyGavgvilklqqqleqlkael 94 
                     +C aCk+lrrkC+k+C++apyf ++q +++fa+vhk+FGasn +k+l+++p ++r da+ +l+yeA ar+rdPvyG+vg+i++lqqq+ +l+ael
  XP_022759512.1   9 PCGACKFLRRKCVKGCIFAPYFDSDQgTAHFAAVHKVFGASNASKMLQRIPAHKRVDAVVTLCYEALARVRDPVYGCVGHIFTLQQQVVNLQAEL 103
                     7***********************9989******************************************************************* PP

          DUF260  95 allkee 100
                     a+++++
  XP_022759512.1 104 AYIRAR 109
                     *98875 PP
Sequence ? help Back to Top
Protein Sequence    Length: 203 aa     Download sequence    
MSANNGGGPC GACKFLRRKC VKGCIFAPYF DSDQGTAHFA AVHKVFGASN ASKMLQRIPA  60
HKRVDAVVTL CYEALARVRD PVYGCVGHIF TLQQQVVNLQ AELAYIRARL STLQRFPLTP  120
PSQAQCLSAT SLHSSSEIRS DLVSSSDMSM HFYTPQPQQT SIELTSFPNP FGQEMENEEL  180
QALAREFVSR YLPGVRCRPS TSS
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G00210.11e-73LBD family protein