PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022759518.1

Organism

Durio zibethinus

Taxonomic ID

66656

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio

Family

GRF

Protein Properties

Length: 438aa MW: 47484.7 Da PI: 9.5428

Description

GRF family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022759518.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	WRC	72.3	5.6e-23	130	175	1	46
WRC 1 daepgrCrRtDGKkWRCsrrvlegkklCErHlhrgrsrsrkskees 46 d+epgrCrRtDGKkWRC ++v++++k+CE H+hrg+ rsrk++e+s XP_022759518.1 130 DPEPGRCRRTDGKKWRCGKNVIPDQKYCEQHMHRGCRRSRKPVEPS 175 79****************************************9975 PP
2	WRC	64.2	1.9e-20	328	364	3	39
WRC 3 epgrCrRtDGKkWRCsrrvlegkklCErHlhrgrsrs 39 epgrCrRtDGK+WRCsr+v++++k+C rH+hrg ++ XP_022759518.1 328 EPGRCRRTDGKRWRCSRDVIPDQKYCARHMHRGARKQ 364 8********************************6554 PP
3	QLQ	42	2.8e-15	60	95	2	37
QLQ 2 aFTaaQlqlLksQilAyKyLaanqPvPpeLlqaiqk 37 aFT +Ql++L Q+l++Ky+a + PvP +L+++i+k XP_022759518.1 60 AFTTTQLHELQLQALIFKYIAGGIPVPLNLVMPIWK 95 8**********************************7 PP

Sequence ? help Back to Top
Protein Sequence Length: 438 aa Download sequence
MFLILGGGAS GTQKRSEEKG GTVKIEDEEE KKEGSPSIKL GLGIDGNMSE KPVIEHGKCA 60 FTTTQLHELQ LQALIFKYIA GGIPVPLNLV MPIWKTVASS FGSAHGGIYE QYPSFVGISP 120 QGFDYRNMMD PEPGRCRRTD GKKWRCGKNV IPDQKYCEQH MHRGCRRSRK PVEPSQITLP 180 DTTLLKSSNK ESENSKNHST PVSVLHMKPT YCKTSTSHET AAMDSNNVCS NRNSISINAT 240 TSSTIIVATN NGIKNNSKRN KSSPNTSERG EDKLSVSNNN MIIRSSKAGN KAAVGNSISL 300 GVGFSPKSVL QVLGCSSSCV HKNEIGLEPG RCRRTDGKRW RCSRDVIPDQ KYCARHMHRG 360 ARKQVEVSQP VAIPSIGDCP PSRSTIANKA ACGVLSTSLS MSIPSPGLIT QDEKSMSSSS 420 ETTISDTTIT AFENGNFS

Sequence ? help Back to Top

Protein Sequence Length: 438 aa Download sequence

MFLILGGGAS GTQKRSEEKG GTVKIEDEEE KKEGSPSIKL GLGIDGNMSE KPVIEHGKCA  60
FTTTQLHELQ LQALIFKYIA GGIPVPLNLV MPIWKTVASS FGSAHGGIYE QYPSFVGISP  120
QGFDYRNMMD PEPGRCRRTD GKKWRCGKNV IPDQKYCEQH MHRGCRRSRK PVEPSQITLP  180
DTTLLKSSNK ESENSKNHST PVSVLHMKPT YCKTSTSHET AAMDSNNVCS NRNSISINAT  240
TSSTIIVATN NGIKNNSKRN KSSPNTSERG EDKLSVSNNN MIIRSSKAGN KAAVGNSISL  300
GVGFSPKSVL QVLGCSSSCV HKNEIGLEPG RCRRTDGKRW RCSRDVIPDQ KYCARHMHRG  360
ARKQVEVSQP VAIPSIGDCP PSRSTIANKA ACGVLSTSLS MSIPSPGLIT QDEKSMSSSS  420
ETTISDTTIT AFENGNFS

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G37740.1	5e-30	GRF family protein