PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022759529.1

Organism

Durio zibethinus

Taxonomic ID

66656

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio

Family

MIKC_MADS

Protein Properties

Length: 243aa MW: 27907.9 Da PI: 9.107

Description

MIKC_MADS family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022759529.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	SRF-TF	100.2	8e-32	9	58	1	50
S---SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSEEEEEE CS SRF-TF 1 krienksnrqvtfskRrngilKKAeELSvLCdaevaviifsstgklyeys 50 krienk+nrqvtfskRrng+lKKA+ELSvLCdaeva+iifss+gklye+ XP_022759529.1 9 KRIENKINRQVTFSKRRNGLLKKAYELSVLCDAEVALIIFSSRGKLYEFG 58 79**********************************************95 PP
2	K-box	97.7	1.8e-32	81	171	10	100
K-box 10 eeakaeslqqelakLkkeienLqreqRhllGedLesLslkeLqqLeqqLekslkkiRskKnellleqieelqkkekelqeenkaLrkklee 100 e++++s++qe++kLk+++e Lqr+qRhllGe+L++L++keLq+Le+qLe +l R++K+++++eq+e+l+kke++l + nk+L+ klee XP_022759529.1 81 LERETQSWYQEVTKLKAKYEALQRTQRHLLGENLGPLNVKELQNLEKQLEGALALARQRKTQIMIEQMEDLRKKERQLGDLNKQLKIKLEE 171 46779*********************************************************************************99986 PP

Sequence ? help Back to Top
Protein Sequence Length: 243 aa Download sequence
MGRGRVELKR IENKINRQVT FSKRRNGLLK KAYELSVLCD AEVALIIFSS RGKLYEFGSS 60 GMTKTLERYQ RCCFTPQDNS LERETQSWYQ EVTKLKAKYE ALQRTQRHLL GENLGPLNVK 120 ELQNLEKQLE GALALARQRK TQIMIEQMED LRKKERQLGD LNKQLKIKLE EEGQSLKTIQ 180 GLWSSGAAAE NSNFPLHPSH THPMECDHEP VLEIGYHHYV QAEGSAVPKS MAGETNFIHG 240 WVI

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G45650.1	1e-123	MIKC_MADS family protein