PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022759588.1
Organism
Durio zibethinus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio
Family MIKC_MADS
Protein Properties Length: 212aa    MW: 24845.5 Da    PI: 9.4235
Description MIKC_MADS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022759588.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1SRF-TF94.45.2e-30959151
                    S---SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSEEEEEE- CS
          SRF-TF  1 krienksnrqvtfskRrngilKKAeELSvLCdaevaviifsstgklyeyss 51
                    krien + rqvtfskRrng+lKKA+ELSvLCdae+a+iifs++g+lye+ss
  XP_022759588.1  9 KRIENATSRQVTFSKRRNGLLKKAFELSVLCDAEIALIIFSPRGNLYEFSS 59
                    79***********************************************96 PP
2K-box713.7e-2483172998
           K-box   9 leeakaeslqqelakLkkeienLqreqRhllGedLesLslkeLqqLeqqLekslkkiRskKnellleqieelqkkekelqeenkaLrkkl 98 
                     lee+ +++ ++++  + k+i+ L+ ++R+llG +Le++sl+eLq Le+qLe+sl++ R++Kn+l+ eq+e+l++ e++l+een +Lr+k 
  XP_022759588.1  83 LEESMQNNVKEDAYSMAKKIKFLEDSKRKLLGYGLEPCSLNELQLLENQLERSLSRLRARKNQLFWEQMEKLKEEERRLREENAKLREKC 172
                     678888999******************************************************************************995 PP
Sequence ? help Back to Top
Protein Sequence    Length: 212 aa     Download sequence    
MVRGKIQMKR IENATSRQVT FSKRRNGLLK KAFELSVLCD AEIALIIFSP RGNLYEFSSC  60
SMNKTIERYQ KREKDLGIIS EVLEESMQNN VKEDAYSMAK KIKFLEDSKR KLLGYGLEPC  120
SLNELQLLEN QLERSLSRLR ARKNQLFWEQ MEKLKEEERR LREENAKLRE KCGMQPRQPS  180
TSKSDDHTEP MEVETELFIG PPEGSIQRNH KT
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G11880.13e-54MIKC_MADS family protein