PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022759592.1
Organism
Durio zibethinus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio
Family LBD
Protein Properties Length: 169aa    MW: 19114 Da    PI: 6.5041
Description LBD family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022759592.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1DUF2601247.8e-3914112199
          DUF260   1 aCaaCkvlrrkCakdCvlapyfpaeqpkkfanvhklFGasnvlkllkalpeeeredamsslvyeAearardPvyGavgvilklqqqleqlkaela 95 
                     +CaaC++lrr+C ++C+lapyfp ++ +kfa vhk+FGasnv+k+++ ++e++reda+++lvyeA ar+rdPvyG++g i++lq+ +++lk +l+
  XP_022759592.1  14 PCAACRMLRRRCDSSCILAPYFPCNEIEKFAGVHKVFGASNVIKMIQMVEETNREDAAKALVYEATARIRDPVYGSTGAIFQLQKMVQELKMQLE 108
                     7*********************************************************************************************9 PP

          DUF260  96 llke 99 
                     ++k+
  XP_022759592.1 109 STKA 112
                     9886 PP
Sequence ? help Back to Top
Protein Sequence    Length: 169 aa     Download sequence    
MSLEAQARAR THQPCAACRM LRRRCDSSCI LAPYFPCNEI EKFAGVHKVF GASNVIKMIQ  60
MVEETNREDA AKALVYEATA RIRDPVYGST GAIFQLQKMV QELKMQLEST KARVLELQQQ  120
KNQLLGILLN VNHLDLLSPI DHGGSFSLDY DDSMAYDPSK FPVESDWIF
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G28500.12e-43LBD family protein