PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022759608.1

Organism

Durio zibethinus

Taxonomic ID

66656

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio

Family

bHLH

Protein Properties

Length: 496aa MW: 55205.1 Da PI: 5.502

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022759608.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	38.2	2.7e-12	319	364	4	54
HHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS HLH 4 ahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54 +h e+Er+RR+++N++f Lr ++P+ +++Ka+ L Av YI++L XP_022759608.1 319 NHVEAERQRREKLNHRFYALRAVVPNV-----SRMDKASLLSDAVSYINEL 364 799*********************6.....4*************998 PP

Sequence ? help Back to Top
Protein Sequence Length: 496 aa Download sequence
MEELIISPSS SSSLVSFSQE TPPSTLQQRL QFVIQSQQEW WTYAIFWQTS NDDHGRLILA 60 WGDGHFQGTK DTSPKLSVNN ISNSQGLHNE RRKVMKGIQA LIGDNHDIDM SMIDGSDITD 120 AEWFYVMSLT RSFSAGDGIP GKVLSTGSLV WLTGAHELQF YSCERAREAQ MHGIETLVCI 180 PTSCGVLELG SSDMIRENWS LVQQVKSLFG SDPIGLVPKQ SSPNPNITPG PIQFLDRNIS 240 FADIGIIAGV QEEDKSPDNK QENHSNQTKK DSTKPEQYSY AESEHSDSDC PLLAMNNIEK 300 RVPKKRGRKP GLGRETPLNH VEAERQRREK LNHRFYALRA VVPNVSRMDK ASLLSDAVSY 360 INELKAKIEE LESQLQRECK KVKVEMVDAM DNQSTTTSVD QAARPSNSSS GTAGSGGLEV 420 DIKIMGNDAM IRVQSANVNY PAARLMGALR DLEFQVHHAS MSCVNELMLQ DILVRIPDGS 480 RTEEGLKSDL LRRLEQ

Sequence ? help Back to Top

Protein Sequence Length: 496 aa Download sequence

MEELIISPSS SSSLVSFSQE TPPSTLQQRL QFVIQSQQEW WTYAIFWQTS NDDHGRLILA  60
WGDGHFQGTK DTSPKLSVNN ISNSQGLHNE RRKVMKGIQA LIGDNHDIDM SMIDGSDITD  120
AEWFYVMSLT RSFSAGDGIP GKVLSTGSLV WLTGAHELQF YSCERAREAQ MHGIETLVCI  180
PTSCGVLELG SSDMIRENWS LVQQVKSLFG SDPIGLVPKQ SSPNPNITPG PIQFLDRNIS  240
FADIGIIAGV QEEDKSPDNK QENHSNQTKK DSTKPEQYSY AESEHSDSDC PLLAMNNIEK  300
RVPKKRGRKP GLGRETPLNH VEAERQRREK LNHRFYALRA VVPNVSRMDK ASLLSDAVSY  360
INELKAKIEE LESQLQRECK KVKVEMVDAM DNQSTTTSVD QAARPSNSSS GTAGSGGLEV  420
DIKIMGNDAM IRVQSANVNY PAARLMGALR DLEFQVHHAS MSCVNELMLQ DILVRIPDGS  480
RTEEGLKSDL LRRLEQ

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G32640.1	4e-95	bHLH family protein