PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022759624.1

Organism

Durio zibethinus

Taxonomic ID

66656

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio

Family

bHLH

Protein Properties

Length: 390aa MW: 44279.8 Da PI: 5.6475

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022759624.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	44	3.9e-14	201	252	1	55
CHHHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS HLH 1 rrrahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 +r++h ++Er+RR+++N+ ++ Lr+l+P++ + +K + a+i A++++k+L+ XP_022759624.1 201 QRMTHIAVERNRRRQMNDYLNSLRSLMPPS---YIQKGDQASIIGGAIDFVKELE 252 79**************************...9****************995 PP

Sequence ? help Back to Top
Protein Sequence Length: 390 aa Download sequence
MERLQGPINP CFLGEHLEVE CLEQGFVNSE SLRFGEEEEE EIHFSIPSLE DKMPFLQMLQ 60 SVESPQLFAF KEPNFQTLLR LQHLKKPWEI NNNPFVPEME TQIQALELES CVTHEILDLH 120 SPVKSETKDL TKNPHSSSYF EVVSSESNQD QPKSATGDNC IRGNSGSSPQ KNFTKSPPIT 180 RERRKRKRTK LAKNKEEVES QRMTHIAVER NRRRQMNDYL NSLRSLMPPS YIQKGDQASI 240 IGGAIDFVKE LEQLLQSLEA QKRMRRVEER NNSNNSVSKS AMEISQEESG IGSEDGNYGE 300 EVKAESKSGA AEIEVNVIHN HVNLKIHCSR SPGQLLQAIV TLESLRLTVL HLNITSSQAS 360 VLYSFNLKME DDCKLRSADE IAAAVHQMFS

Sequence ? help Back to Top

Protein Sequence Length: 390 aa Download sequence

MERLQGPINP CFLGEHLEVE CLEQGFVNSE SLRFGEEEEE EIHFSIPSLE DKMPFLQMLQ  60
SVESPQLFAF KEPNFQTLLR LQHLKKPWEI NNNPFVPEME TQIQALELES CVTHEILDLH  120
SPVKSETKDL TKNPHSSSYF EVVSSESNQD QPKSATGDNC IRGNSGSSPQ KNFTKSPPIT  180
RERRKRKRTK LAKNKEEVES QRMTHIAVER NRRRQMNDYL NSLRSLMPPS YIQKGDQASI  240
IGGAIDFVKE LEQLLQSLEA QKRMRRVEER NNSNNSVSKS AMEISQEESG IGSEDGNYGE  300
EVKAESKSGA AEIEVNVIHN HVNLKIHCSR SPGQLLQAIV TLESLRLTVL HLNITSSQAS  360
VLYSFNLKME DDCKLRSADE IAAAVHQMFS

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	183	188	RRKRKR
2	184	191	RKRKRTKL
3	202	213	RMTHIAVERNRR

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G61950.1	1e-74	bHLH family protein