PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022759760.1
Organism
Durio zibethinus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio
Family LBD
Protein Properties Length: 209aa    MW: 22948.3 Da    PI: 8.2055
Description LBD family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022759760.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1DUF260123.61e-38171181101
          DUF260   1 aCaaCkvlrrkCakdCvlapyfpaeq.pkkfanvhklFGasnvlkllkalpeeeredamsslvyeAearardPvyGavgvilklqqqleqlkael 94 
                     +C aCk+lrrkCa+dC++apyf++eq p++fa++hk+FGasnv+kll ++p ++r +a+ +++y A+ar+rdPvyG+v++i++lqqq+++l+a+l
  XP_022759760.1  17 PCGACKFLRRKCASDCIFAPYFCSEQgPARFAAIHKVFGASNVSKLLLHIPAHDRCEAVFTIAYAAQARIRDPVYGCVAHIFALQQQVACLQAQL 111
                     7*************************99******************************************************************* PP

          DUF260  95 allkeel 101
                      ++k++l
  XP_022759760.1 112 MQVKAQL 118
                     *999875 PP
Sequence ? help Back to Top
Protein Sequence    Length: 209 aa     Download sequence    
MATSGSGTAT VTGTGSPCGA CKFLRRKCAS DCIFAPYFCS EQGPARFAAI HKVFGASNVS  60
KLLLHIPAHD RCEAVFTIAY AAQARIRDPV YGCVAHIFAL QQQVACLQAQ LMQVKAQLAQ  120
NAMNLHNIDS QWQGNNLCGV PSIPTYPSYM NPFSPQSSLE SVELNSADSM NMQEIQRREE  180
CSFQGYPKKR PYNCDLGELQ ALALRMMRN
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G42430.16e-63LBD family protein